RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 CAPN15O75808 1086 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 HSPA6P17066 643 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 TNNI2P48788 182 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 NT5DC1Q5TFE4 455 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 WWC2Q6AWC2 1192 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 CIAPIN1Q6FI81 312 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 SHC4Q6S5L8 630 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 SARM1Q6SZW1 724 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.48□□□□□ -0.89
C2CD3-215ENST00000540452 CMTR1Q8N1G2 835 aaKnown RBP9.48□□□□□ -0.89
C2CD3-215ENST00000540452 OXER1Q8TDS5 423 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 SHISA4Q96DD7 197 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 HOOK2Q96ED9 719 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 CUEDC2Q9H467 287 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 SH2D4AQ9H788 454 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 MAGEF1Q9HAY2 307 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 KCNQ5Q9NR82 932 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 KCNH3Q9ULD8 1083 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 PCDHB6Q9Y5E3 794 aa9.48□□□□□ -0.89
C2CD3-215ENST00000540452 BAZ2BQ9UIF8 2168 aaKnown RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 A0A1B0GVL5 298 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 DDTLA6NHG4 134 aaPredicted RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 GCFC2P16383 781 aaKnown RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 CDC25BP30305 580 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 ZNF165P49910 485 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 NAPAP54920 295 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 NONOQ15233 471 aaKnown RBP eCLIP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 ABCB5Q2M3G0 1257 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 RBM26Q5T8P6 1007 aaKnown RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 BTNL9Q6UXG8 535 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 KRBA2Q6ZNG9 492 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 FAM43AQ8N2R8 423 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 SPATA20Q8TB22 786 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 PRMT6Q96LA8 375 aaPredicted RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 CSRNP1Q96S65 589 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 MXD3Q9BW11 206 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 PDGFDQ9GZP0 370 aaPredicted RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 ARHGEF10LQ9HCE6 1279 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 ZNF70Q9UC06 446 aaPredicted RBP9.47□□□□□ -0.89
C2CD3-215ENST00000540452 CLIP2Q9UDT6 1046 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 DACH1Q9UI36 760 aa9.47□□□□□ -0.89
C2CD3-215ENST00000540452 SMTNL1A8MU46 457 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 UBE2Q2LH0YL09 131 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 FZD9O00144 591 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 IKBKBO14920 756 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ZBTB5O15062 677 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 SLC34A2O95436 690 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 SLFN14P0C7P3 912 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 MARCKSP29966 332 aaPredicted RBP9.46□□□□□ -0.9
C2CD3-215ENST00000540452 TXLNAP40222 546 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 NLRP12P59046 1061 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 TPM4P67936 248 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ICA1Q05084 483 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 CAMK4Q16566 473 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ANO6Q4KMQ2 910 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 MOXD1Q6UVY6 613 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 HEATR3Q7Z4Q2 680 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
C2CD3-215ENST00000540452 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
C2CD3-215ENST00000540452 CNNM3Q8NE01 707 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 SYT17Q9BSW7 474 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 MAF1Q9H063 256 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.9
C2CD3-215ENST00000540452 RIC8AQ9NPQ8 531 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ZNF277Q9NRM2 450 aaPredicted RBP9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ZNF219Q9P2Y4 722 aaPredicted RBP9.46□□□□□ -0.9
C2CD3-215ENST00000540452 PNMA2Q9UL42 364 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 PCDHA6Q9UN73 950 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 PCDHA8Q9Y5H6 950 aa9.46□□□□□ -0.9
C2CD3-215ENST00000540452 ATAD5Q96QE3 1844 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 NFKBIEO00221 500 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 SMC2O95347 1197 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 SLC1A4P43007 532 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 CLK2P49760 499 aaKnown RBP9.45□□□□□ -0.9
C2CD3-215ENST00000540452 MRPL12P52815 198 aaKnown RBP9.45□□□□□ -0.9
C2CD3-215ENST00000540452 CXCL9Q07325 125 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 PTGDRQ13258 359 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 AP3B2Q13367 1082 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 IQCB1Q15051 598 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 SLC35G1Q2M3R5 365 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 SLC4A8Q2Y0W8 1093 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 PPP4R3AQ6IN85 833 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 PIK3AP1Q6ZUJ8 805 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 CKAP2LQ8IYA6 745 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 SAMD3Q8N6K7 520 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 CCSER1Q9C0I3 900 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.45□□□□□ -0.9
C2CD3-215ENST00000540452 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
C2CD3-215ENST00000540452 CNTNAP1P78357 1384 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms