RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 FBXO2Q9UK22 296 aaPredicted RBP17.1■□□□□ 0.33
GABARAPL1-208ENST00000540424 SRPRBQ9Y5M8 271 aaKnown RBP17.1■□□□□ 0.33
GABARAPL1-208ENST00000540424 GNPATO15228 680 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 NEDD9Q14511 834 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 LONRF3Q496Y0 759 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 ATXN2Q99700 1313 aaKnown RBP17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 SERPINC1P01008 464 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 RXRBP28702 533 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 VSNL1P62760 191 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 PNOCQ13519 176 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 MAP9Q49MG5 647 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 DPF2Q92785 391 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
GABARAPL1-208ENST00000540424 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 LRRIQ3A6PVS8 624 aaPredicted RBP17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 USP17L12C9JPN9 530 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 USP17L21D6R901 530 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 SYF2O95926 243 aaKnown RBP17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 ATP1A3P13637 1013 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 INPP5BP32019 993 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 PDE4BQ07343 736 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 TBX2Q13207 712 aaPredicted RBP17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 CFAP100Q494V2 611 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 SBK1Q52WX2 424 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 METTL16Q86W50 562 aaKnown RBP17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 MIEF2Q96C03 454 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 CABS1Q96KC9 395 aa17.08■□□□□ 0.33
GABARAPL1-208ENST00000540424 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 CABP5Q9NP86 173 aa17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 PUF60Q9UHX1 559 aaKnown RBP17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 MCM8Q9UJA3 840 aa17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.08■□□□□ 0.32
GABARAPL1-208ENST00000540424 ELF1P32519 619 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 NR5A1Q13285 461 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 POSTNQ15063 836 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 C11orf91Q3C1V1 193 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 WDR93Q6P2C0 686 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 TRIML1Q8N9V2 468 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 SRP68Q9UHB9 627 aaKnown RBP17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 WTIPA6NIX2 430 aaPredicted RBP17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 KCNQ4P56696 695 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 TROAPQ12815 778 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 PPP2R5AQ15172 486 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 ZNF384Q8TF68 577 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 PCDHB6Q9Y5E3 794 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 PCDHA5Q9Y5H7 936 aa17.07■□□□□ 0.32
GABARAPL1-208ENST00000540424 CASZ1Q86V15 1759 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 ERCC3P19447 782 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 SCP2P22307 547 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 CCT5P48643 541 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 ISM2Q6H9L7 571 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 TMTC3Q6ZXV5 915 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 MLKLQ8NB16 471 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 JPH2Q9BR39 696 aaPredicted RBP17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 V9GY48 417 aaPredicted RBP17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 MAST2Q6P0Q8 1798 aa17.06■□□□□ 0.32
GABARAPL1-208ENST00000540424 CYP2D7A0A087X1C5 515 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 TMCO5BA8MYB1 307 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 MAP2K1Q02750 393 aaPredicted RBP17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 FUT2Q10981 343 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 PKN1Q16512 942 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 NT5DC1Q5TFE4 455 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 SGSM3Q96HU1 749 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 VPS54Q9P1Q0 977 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 POLR2DO15514 142 aaKnown RBP17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 PRDM1O75626 825 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 OXER1Q8TDS5 423 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
GABARAPL1-208ENST00000540424 CHUKO15111 745 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 KLRK1P26718 216 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 KIF5BP33176 963 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 GSTO1P78417 241 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 KARSQ15046 597 aaKnown RBP17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 CCDC178Q5BJE1 867 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 AMOTL1Q8IY63 956 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 DLEC1Q9Y238 1755 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 TMEM232C9JQI7 657 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 CCDC175P0C221 793 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 RFC4P35249 363 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 WHAMMP3Q1A5X7 153 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 KIF4BQ2VIQ3 1234 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 PREPLQ4J6C6 727 aaPredicted RBP17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 IGSF22Q8N9C0 903 aa17.04■□□□□ 0.32
GABARAPL1-208ENST00000540424 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms