RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 TMEM31Q5JXX7 168 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
LRP6-204ENST00000540415 SDR42E1Q8WUS8 393 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
LRP6-204ENST00000540415 GLT1D1Q96MS3 346 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 MCM9Q9NXL9 1143 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 ZNF214Q9UL59 606 aaPredicted RBP9.72□□□□□ -0.85
LRP6-204ENST00000540415 FAM184BQ9ULE4 1060 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 ADAMTS5Q9UNA0 930 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 DIS3Q9Y2L1 958 aaKnown RBP9.72□□□□□ -0.85
LRP6-204ENST00000540415 TMX2Q9Y320 296 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 RIPK3Q9Y572 518 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 ELP1O95163 1332 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 MYO5AQ9Y4I1 1855 aaKnown RBP9.72□□□□□ -0.85
LRP6-204ENST00000540415 TCF20Q9UGU0 1960 aaKnown RBP9.72□□□□□ -0.85
LRP6-204ENST00000540415 SMCHD1A6NHR9 2005 aa9.72□□□□□ -0.85
LRP6-204ENST00000540415 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 A0A0U1RQG5 324 aaPredicted RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 VWA5AO00534 786 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 ERC2O15083 957 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 WDR46O15213 610 aaKnown RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 TLL1O43897 1013 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 DUSP11O75319 330 aaKnown RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 BCAR3O75815 825 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 CD4P01730 458 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 FGBP02675 491 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 RARSP54136 660 aaKnown RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 OS9Q13438 667 aaPredicted RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 POLA2Q14181 598 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 CCDC174Q6PII3 467 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 TMEM179Q6ZVK1 233 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 SPRED2Q7Z698 418 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 EAF2Q96CJ1 260 aaPredicted RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 FGD4Q96M96 766 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 WNT8AQ9H1J5 351 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 TSPYL2Q9H2G4 693 aaPredicted RBP9.71□□□□□ -0.86
LRP6-204ENST00000540415 C1orf115Q9H7X2 142 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 CD320Q9NPF0 282 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 MTCH2Q9Y6C9 303 aa9.71□□□□□ -0.86
LRP6-204ENST00000540415 MYH1P12882 1939 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 PRKAB2O43741 272 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 RAD21O60216 631 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 SURF6O75683 361 aaKnown RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 CST5P28325 142 aaPredicted RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 SLC4A3P48751 1232 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 ACVR2BQ13705 512 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 CCDC144BQ3MJ40 725 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 GNASQ5JWF2 1037 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 FAM83BQ5T0W9 1011 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 LCORLQ8N3X6 602 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 SCLYQ96I15 445 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 NUP88Q99567 741 aaPredicted RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 TRPV6Q9H1D0 765 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 UPF3AQ9H1J1 476 aaKnown RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 HIPK3Q9H422 1215 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 DCP1AQ9NPI6 582 aaPredicted RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 PPP1R9AQ9ULJ8 1098 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 DDX49Q9Y6V7 483 aaKnown RBP9.7□□□□□ -0.86
LRP6-204ENST00000540415 ASTN1O14525 1302 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 GRIN2DO15399 1336 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 MROH7Q68CQ1 1323 aa9.7□□□□□ -0.86
LRP6-204ENST00000540415 DNAJC25-GNG10A0A024R161 153 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 ZBBXA8MT70 800 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 CA3P07451 260 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 EEF2P13639 858 aaKnown RBP9.69□□□□□ -0.86
LRP6-204ENST00000540415 TRIM27P14373 513 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 PDE6AP16499 860 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 GJA9P57773 515 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 TTLL4Q14679 1199 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 TMEM63BQ5T3F8 832 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 SNRNP48Q6IEG0 339 aaKnown RBP9.69□□□□□ -0.86
LRP6-204ENST00000540415 CXCL17Q6UXB2 119 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 MAMDC4Q6UXC1 1216 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 MUC6Q6W4X9 2439 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 PCSK9Q8NBP7 692 aaKnown RBP9.69□□□□□ -0.86
LRP6-204ENST00000540415 NOC4LQ9BVI4 516 aaKnown RBP9.69□□□□□ -0.86
LRP6-204ENST00000540415 SLC4A7Q9Y6M7 1214 aa9.69□□□□□ -0.86
LRP6-204ENST00000540415 TLR3O15455 904 aaKnown RBP9.68□□□□□ -0.86
LRP6-204ENST00000540415 GPR37L1O60883 481 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 CHGBP05060 677 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 PSMC6P62333 389 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 AAK1Q2M2I8 961 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 ARMCX2Q7L311 632 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 CERS3Q8IU89 383 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 SLC43A3Q8NBI5 491 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 SSH3Q8TE77 659 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 DDX11Q96FC9 970 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 CRNKL1Q9BZJ0 848 aaKnown RBP9.68□□□□□ -0.86
LRP6-204ENST00000540415 KATNBL1Q9H079 304 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 ARMT1Q9H993 441 aa9.68□□□□□ -0.86
LRP6-204ENST00000540415 PCDHA11Q9Y5I1 949 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms