RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
PBX1-212ENST00000540236 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
PBX1-212ENST00000540236 SPICE1Q8N0Z3 855 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 MYCBPAPQ8TBZ2 947 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 ANKRD24Q8TF21 1146 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
PBX1-212ENST00000540236 GJC1P36383 396 aa12.21□□□□□ -0.46
PBX1-212ENST00000540236 RASSF2P50749 326 aa12.21□□□□□ -0.46
PBX1-212ENST00000540236 KANK3Q6NY19 840 aa12.21□□□□□ -0.46
PBX1-212ENST00000540236 BRAPQ7Z569 592 aa12.21□□□□□ -0.46
PBX1-212ENST00000540236 PUS7Q96PZ0 661 aaKnown RBP12.21□□□□□ -0.46
PBX1-212ENST00000540236 CARMIL3Q8ND23 1372 aa12.21□□□□□ -0.46
PBX1-212ENST00000540236 LRRC36Q1X8D7 754 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 C6orf163Q5TEZ5 329 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 BICDL1Q6ZP65 573 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 MLKLQ8NB16 471 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 HELLSQ9NRZ9 838 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 CWC25Q9NXE8 425 aaPredicted RBP12.2□□□□□ -0.46
PBX1-212ENST00000540236 CPP00450 1065 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 KRT40Q6A162 431 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 VPS52Q8N1B4 723 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 PIP4K2CQ8TBX8 421 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 BICD1Q96G01 975 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 ABHD10Q9NUJ1 306 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 SSH2Q76I76 1423 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 CCDC189A1A4V9 331 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 OATP04181 439 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 KCNA3P22001 575 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 MECOMQ03112 1051 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 NCOA7Q8NI08 942 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 CCDC26Q8TAB7 109 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 CMA1P23946 247 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 MAGEA1P43355 309 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 COPB1P53618 953 aaKnown RBP12.2□□□□□ -0.46
PBX1-212ENST00000540236 HS2ST1Q7LGA3 356 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 ITFG2Q969R8 447 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 PFDN4Q9NQP4 134 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 DNMT1P26358 1616 aaKnown RBP12.2□□□□□ -0.46
PBX1-212ENST00000540236 NOS1P29475 1434 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 TRIM37O94972 964 aa12.2□□□□□ -0.46
PBX1-212ENST00000540236 SFI1A8K8P3 1242 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 TRPA1O75762 1119 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 ETS2P15036 469 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 STX2P32856 288 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 DYNC1I2Q13409 638 aaKnown RBP12.19□□□□□ -0.46
PBX1-212ENST00000540236 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 EXOC1Q9NV70 894 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
PBX1-212ENST00000540236 E7EWF7 191 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 PARP1P09874 1014 aaKnown RBP12.19□□□□□ -0.46
PBX1-212ENST00000540236 ELF3P78545 371 aaPredicted RBP12.19□□□□□ -0.46
PBX1-212ENST00000540236 MAP3K12Q12852 859 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 UAP1Q16222 522 aaPredicted RBP12.19□□□□□ -0.46
PBX1-212ENST00000540236 PANX2Q96RD6 677 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 SMC6Q96SB8 1091 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 RTEL1Q9NZ71 1219 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 KLHL14Q9P2G3 628 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 DMPKQ09013 629 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.19□□□□□ -0.46
PBX1-212ENST00000540236 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 PRPHP41219 470 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 NLRP5P59047 1200 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 KIF22Q14807 665 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 CCDC65Q8IXS2 484 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 FUKQ8N0W3 1084 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 NUDCD1Q96RS6 583 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 DUSP10Q9Y6W6 482 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 ADCY9O60503 1353 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 KRIT1O00522 736 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 EZH1Q92800 747 aaPredicted RBP12.19□□□□□ -0.46
PBX1-212ENST00000540236 GORASP1Q9BQQ3 440 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 MROH7-TTC4A0A0A0MT08 1334 aa12.19□□□□□ -0.46
PBX1-212ENST00000540236 ATL3Q6DD88 541 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 LRRC45Q96CN5 670 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 TSC22D4Q9Y3Q8 395 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 A0A1W2PP64 1363 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 PDIA3P30101 505 aaKnown RBP12.18□□□□□ -0.46
PBX1-212ENST00000540236 PPP2R2AP63151 447 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 TSEN2Q8NCE0 465 aaKnown RBP12.18□□□□□ -0.46
PBX1-212ENST00000540236 HNRNPLLQ8WVV9 542 aaKnown RBP12.18□□□□□ -0.46
PBX1-212ENST00000540236 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 ZNF518AQ6AHZ1 1483 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 TRIM49BA6NDI0 452 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 ZBTB43O43298 467 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 CIB2O75838 187 aa12.18□□□□□ -0.46
PBX1-212ENST00000540236 RFC1P35251 1148 aaPredicted RBP12.18□□□□□ -0.46
PBX1-212ENST00000540236 CARSP49589 748 aaKnown RBP12.18□□□□□ -0.46
PBX1-212ENST00000540236 BTKQ06187 659 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms