RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 IQCEQ6IPM2 695 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 STK11IPQ8N1F8 1099 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 SLC24A3Q9HC58 644 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 PKD1L3Q7Z443 1732 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 RGPD3A6NKT7 1758 aaPredicted RBP9.76□□□□□ -0.85
DDB1-217ENST00000540166 RGPD4Q7Z3J3 1758 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 C4AP0C0L4 1744 aa9.76□□□□□ -0.85
DDB1-217ENST00000540166 BAG3O95817 575 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 HNRNPH1P31943 449 aaKnown RBP9.75□□□□□ -0.85
DDB1-217ENST00000540166 HAND2P61296 217 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 TFCP2Q12800 502 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 PICALMQ13492 652 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 CEP85LQ5SZL2 805 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 LRRC31Q6UY01 552 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 DHX32Q7L7V1 743 aaKnown RBP9.75□□□□□ -0.85
DDB1-217ENST00000540166 CCDC114Q96M63 670 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 WDR24Q96S15 920 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 SPTLC2O15270 562 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 SSBP05455 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
DDB1-217ENST00000540166 PTPN21Q16825 1174 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 STX10O60499 249 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 IGKV5-2P06315 115 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 GNGT1P63211 74 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 TCP10Q12799 353 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 DGKZQ13574 1117 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 NAPGQ99747 312 aaPredicted RBP9.75□□□□□ -0.85
DDB1-217ENST00000540166 CAPS2Q9BXY5 557 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 RCOR1Q9UKL0 485 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 KLRG2A4D1S0 409 aaPredicted RBP9.75□□□□□ -0.85
DDB1-217ENST00000540166 EYA2O00167 538 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 OPA1O60313 960 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 TRPM4Q8TD43 1214 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 ATRIPQ8WXE1 791 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 DBNDD2Q9BQY9 259 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 DENND2AQ9ULE3 1009 aa9.75□□□□□ -0.85
DDB1-217ENST00000540166 SCAF8Q9UPN6 1271 aaKnown RBP9.75□□□□□ -0.85
DDB1-217ENST00000540166 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 CHUKO15111 745 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 ZNF202O95125 648 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 MYCP01106 439 aaPredicted RBP9.74□□□□□ -0.85
DDB1-217ENST00000540166 ATP1A3P13637 1013 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 TOB2Q14106 344 aaPredicted RBP9.74□□□□□ -0.85
DDB1-217ENST00000540166 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 KCND1Q9NSA2 647 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 SAMM50Q9Y512 469 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 WNK3Q9BYP7 1800 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 IDH1O75874 414 aaKnown RBP9.74□□□□□ -0.85
DDB1-217ENST00000540166 GCKP35557 465 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 USP5P45974 858 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 RESTQ13127 1097 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 KIAA1328Q86T90 577 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 CEP120Q8N960 986 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 MYO6Q9UM54 1294 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 TAF6LQ9Y6J9 622 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 AKR1B15C9JRZ8 316 aaPredicted RBP9.74□□□□□ -0.85
DDB1-217ENST00000540166 AP1ARQ63HQ0 302 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 SPECC1LQ69YQ0 1117 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 LPIN2Q92539 896 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 CDCA5Q96FF9 252 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
DDB1-217ENST00000540166 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 GOLGA6L10A6NI86 522 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 CUTAO60888 179 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 MARCKSP29966 332 aaPredicted RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 SCRN1Q12765 414 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 ADALQ6DHV7 355 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 NAA16Q6N069 864 aaPredicted RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 SMCR8Q8TEV9 937 aaPredicted RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 C7orf43Q8WVR3 580 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 RSRC1Q96IZ7 334 aaKnown RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 TRIM6Q9C030 488 aaPredicted RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 SUGCTQ9HAC7 445 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 CPSF2Q9P2I0 782 aaKnown RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 CHD4Q14839 1912 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 DLG5Q8TDM6 1919 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 HLA-DOAP06340 250 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 ELF1P32519 619 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 NDUFA8P51970 172 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 KLHL10Q6JEL2 608 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 TACO1Q9BSH4 297 aaKnown RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 MPHOSPH10O00566 681 aaKnown RBP9.73□□□□□ -0.85
DDB1-217ENST00000540166 CYP21A2P08686 494 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 ATP2B2Q01814 1243 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 WHAMMP3Q1A5X7 153 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 CCDC121Q6ZUS5 278 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 GOLPH3LQ9H4A5 285 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 PCDHA7Q9UN72 937 aa9.73□□□□□ -0.85
DDB1-217ENST00000540166 GOLGA8BA8MQT2 603 aa9.72□□□□□ -0.85
DDB1-217ENST00000540166 HSF2BPO75031 334 aa9.72□□□□□ -0.85
DDB1-217ENST00000540166 UQCRFS1P1P0C7P4 283 aa9.72□□□□□ -0.85
DDB1-217ENST00000540166 ST3GAL1Q11201 340 aa9.72□□□□□ -0.85
DDB1-217ENST00000540166 IMMTQ16891 758 aaKnown RBP9.72□□□□□ -0.85
DDB1-217ENST00000540166 TNNI3KQ59H18 835 aa9.72□□□□□ -0.85
DDB1-217ENST00000540166 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
DDB1-217ENST00000540166 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms