RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PRPF38AQ8NAV1 312 aaKnown RBP17.94■□□□□ 0.46
DDB1-216ENST00000539739 SNX21Q969T3 373 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 ZIC5Q96T25 663 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 SLF1Q9BQI6 1058 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 HOXC10Q9NYD6 342 aa17.94■□□□□ 0.46
DDB1-216ENST00000539739 NID2Q14112 1375 aa17.93■□□□□ 0.46
DDB1-216ENST00000539739 CPLX1O14810 134 aa17.93■□□□□ 0.46
DDB1-216ENST00000539739 TTBK2Q6IQ55 1244 aa17.93■□□□□ 0.46
DDB1-216ENST00000539739 SAMD1Q6SPF0 538 aaPredicted RBP17.93■□□□□ 0.46
DDB1-216ENST00000539739 BTNL9Q6UXG8 535 aa17.93■□□□□ 0.46
DDB1-216ENST00000539739 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
DDB1-216ENST00000539739 ASCC2Q9H1I8 757 aaPredicted RBP17.93■□□□□ 0.46
DDB1-216ENST00000539739 LOC285556D6RIA3 1793 aa17.93■□□□□ 0.46
DDB1-216ENST00000539739 MYPNQ86TC9 1320 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDB1-216ENST00000539739 ALDH1A1P00352 501 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 CDC27P30260 824 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 ADD1P35611 737 aaKnown RBP17.92■□□□□ 0.46
DDB1-216ENST00000539739 TMTC3Q6ZXV5 915 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 PARK7Q99497 189 aaKnown RBP17.92■□□□□ 0.46
DDB1-216ENST00000539739 UBA5Q9GZZ9 404 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 FBXO28Q9NVF7 368 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 PPP1R9AQ9ULJ8 1098 aa17.92■□□□□ 0.46
DDB1-216ENST00000539739 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
DDB1-216ENST00000539739 LARGE1O95461 756 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 DSG3P32926 999 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 SLC16A2P36021 539 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 SCRN1Q12765 414 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 SYDE2Q5VT97 1194 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 GTF3C6Q969F1 213 aa17.91■□□□□ 0.46
DDB1-216ENST00000539739 NCOA5Q9HCD5 579 aaKnown RBP17.91■□□□□ 0.46
DDB1-216ENST00000539739 FAM217BQ9NTX9 383 aaPredicted RBP17.91■□□□□ 0.46
DDB1-216ENST00000539739 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 FDX1P10109 184 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 GTF3C2Q8WUA4 911 aaPredicted RBP17.9■□□□□ 0.46
DDB1-216ENST00000539739 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 P2RX7Q99572 595 aaKnown RBP17.9■□□□□ 0.46
DDB1-216ENST00000539739 K7ELQ4 463 aaPredicted RBP17.9■□□□□ 0.46
DDB1-216ENST00000539739 CDKL5O76039 1030 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
DDB1-216ENST00000539739 ADGRF4Q8IZF3 695 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 CCDC82Q8N4S0 544 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 SRBD1Q8N5C6 995 aaKnown RBP17.9■□□□□ 0.46
DDB1-216ENST00000539739 SMCR8Q8TEV9 937 aaPredicted RBP17.9■□□□□ 0.46
DDB1-216ENST00000539739 SPZ1Q9BXG8 430 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 VAT1LQ9HCJ6 419 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 PRR12Q9ULL5 1215 aa17.9■□□□□ 0.46
DDB1-216ENST00000539739 SPDYE16A6NNV3 312 aaPredicted RBP17.89■□□□□ 0.45
DDB1-216ENST00000539739 ZBED4O75132 1171 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 HERVK_113P62684 666 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
DDB1-216ENST00000539739 MB21D1Q8N884 522 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 ATG4CQ96DT6 458 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 CPVLQ9H3G5 476 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 RIOX1Q9H6W3 641 aa17.89■□□□□ 0.45
DDB1-216ENST00000539739 CYP2C8P10632 490 aa17.88■□□□□ 0.45
DDB1-216ENST00000539739 IFNAR1P17181 557 aa17.88■□□□□ 0.45
DDB1-216ENST00000539739 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
DDB1-216ENST00000539739 BECN1Q14457 450 aa17.88■□□□□ 0.45
DDB1-216ENST00000539739 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
DDB1-216ENST00000539739 NBPF11Q86T75 865 aa17.88■□□□□ 0.45
DDB1-216ENST00000539739 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
DDB1-216ENST00000539739 ZFYVE28Q9HCC9 887 aa17.88■□□□□ 0.45
DDB1-216ENST00000539739 VWA5AO00534 786 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 GCLCP48506 637 aaPredicted RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 RBM27Q9P2N5 1060 aaKnown RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 SEC63Q9UGP8 760 aaKnown RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 ADAMTS5Q9UNA0 930 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 CA12O43570 354 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 CYTH3O43739 400 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 MAP2K1Q02750 393 aaPredicted RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 SSRP1Q08945 709 aaKnown RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 NTRK3Q16288 839 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 HOMER1Q86YM7 354 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 LLPHQ9BRT6 129 aaKnown RBP17.87■□□□□ 0.45
DDB1-216ENST00000539739 SLC38A10Q9HBR0 1119 aa17.87■□□□□ 0.45
DDB1-216ENST00000539739 CNTNAP5Q8WYK1 1306 aa17.86■□□□□ 0.45
DDB1-216ENST00000539739 FUT2Q10981 343 aa17.86■□□□□ 0.45
DDB1-216ENST00000539739 PIBF1Q8WXW3 757 aa17.86■□□□□ 0.45
DDB1-216ENST00000539739 MTMR8Q96EF0 704 aa17.86■□□□□ 0.45
DDB1-216ENST00000539739 RNF26Q9BY78 433 aaPredicted RBP17.86■□□□□ 0.45
DDB1-216ENST00000539739 RANBP17Q9H2T7 1088 aaKnown RBP17.86■□□□□ 0.45
DDB1-216ENST00000539739 PNMA2Q9UL42 364 aa17.86■□□□□ 0.45
DDB1-216ENST00000539739 RABGAP1Q9Y3P9 1069 aa17.86■□□□□ 0.45
DDB1-216ENST00000539739 ZBTB5O15062 677 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 CDC37Q16543 378 aaPredicted RBP17.85■□□□□ 0.45
DDB1-216ENST00000539739 SLC35G1Q2M3R5 365 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 DNAJC5GQ8N7S2 189 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 PHKBQ93100 1093 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 PIGSQ96S52 555 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 PAGR1Q9BTK6 254 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 BEGAINQ9BUH8 593 aa17.85■□□□□ 0.45
DDB1-216ENST00000539739 SLC26A6Q9BXS9 759 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms