RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DCAF4Q8WV16 495 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
SPARC-209ENST00000539687 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
SPARC-209ENST00000539687 MAGEF1Q9HAY2 307 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 DDX4Q9NQI0 724 aaKnown RBP11.58□□□□□ -0.56
SPARC-209ENST00000539687 NYAP2Q9P242 653 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
SPARC-209ENST00000539687 MYH8P13535 1937 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 M0R2N6 131 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 POLR2DO15514 142 aaKnown RBP11.57□□□□□ -0.56
SPARC-209ENST00000539687 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 MYL1P05976 194 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 SLFN14P0C7P3 912 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 AKR1B1P15121 316 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 POLD1P28340 1107 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 PTGER2P43116 358 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 PTGDRQ13258 359 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 NONOQ15233 471 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPARC-209ENST00000539687 AOC3Q16853 763 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
SPARC-209ENST00000539687 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.57□□□□□ -0.56
SPARC-209ENST00000539687 METTL16Q86W50 562 aaKnown RBP11.57□□□□□ -0.56
SPARC-209ENST00000539687 DRC7Q8IY82 874 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 MKL1Q969V6 931 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 AK8Q96MA6 479 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 CLIC6Q96NY7 704 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 SYT17Q9BSW7 474 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
SPARC-209ENST00000539687 RRAGDQ9NQL2 400 aaPredicted RBP11.57□□□□□ -0.56
SPARC-209ENST00000539687 HERC5Q9UII4 1024 aaKnown RBP11.57□□□□□ -0.56
SPARC-209ENST00000539687 PSME4Q14997 1843 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 hCG_1642624A0A1W2PR95 340 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 MPHOSPH10O00566 681 aaKnown RBP11.56□□□□□ -0.56
SPARC-209ENST00000539687 CYTH3O43739 400 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 NRDCO43847 1150 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 HOXA7P31268 230 aaPredicted RBP11.56□□□□□ -0.56
SPARC-209ENST00000539687 MYL5Q02045 173 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 ZNF174Q15697 407 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 LONRF3Q496Y0 759 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 CERKLQ49MI3 558 aaPredicted RBP11.56□□□□□ -0.56
SPARC-209ENST00000539687 FKBP1CQ5VVH2 108 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 C11orf57Q6ZUT1 292 aaPredicted RBP11.56□□□□□ -0.56
SPARC-209ENST00000539687 ZSCAN29Q8IWY8 852 aaPredicted RBP11.56□□□□□ -0.56
SPARC-209ENST00000539687 DHX40Q8IX18 779 aaKnown RBP11.56□□□□□ -0.56
SPARC-209ENST00000539687 AGBL3Q8NEM8 1001 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 SHISA4Q96DD7 197 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 GSDMAQ96QA5 445 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 CUEDC2Q9H467 287 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 RMND1Q9NWS8 449 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 IMPACTQ9P2X3 320 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 CLIP2Q9UDT6 1046 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 PCDHA6Q9UN73 950 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 PCDHA8Q9Y5H6 950 aa11.56□□□□□ -0.56
SPARC-209ENST00000539687 GREB1LQ9C091 1923 aaPredicted RBP11.55□□□□□ -0.56
SPARC-209ENST00000539687 PNMA6FA0A0J9YX94 578 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 SMCO2A6NFE2 343 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 C21orf2O43822 256 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 VIL1P09327 827 aaKnown RBP11.55□□□□□ -0.56
SPARC-209ENST00000539687 ADCY7P51828 1080 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
SPARC-209ENST00000539687 GSDMDP57764 484 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 DPCR1Q3MIW9 517 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 CFAP100Q494V2 611 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 USP17L2Q6R6M4 530 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 NEK8Q86SG6 692 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 NIM1KQ8IY84 436 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 REXO1Q8N1G1 1221 aaKnown RBP11.55□□□□□ -0.56
SPARC-209ENST00000539687 LARGE2Q8N3Y3 721 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 AOPEPQ8N6M6 819 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 GMCL1P1Q8NEA9 526 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
SPARC-209ENST00000539687 MXD3Q9BW11 206 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 RAB34Q9BZG1 259 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 ZNF646O15015 1829 aaPredicted RBP11.55□□□□□ -0.56
SPARC-209ENST00000539687 KIF13BQ9NQT8 1826 aa11.55□□□□□ -0.56
SPARC-209ENST00000539687 UTRNP46939 3433 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 VWA3AA6NCI4 1184 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
SPARC-209ENST00000539687 GOLGA8HP0CJ92 632 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 ERCC5P28715 1186 aaPredicted RBP11.54□□□□□ -0.56
SPARC-209ENST00000539687 MCM7P33993 719 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 SARSP49591 514 aaKnown RBP11.54□□□□□ -0.56
SPARC-209ENST00000539687 NFIAQ12857 509 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 DLGAP5Q15398 846 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 CCDC96Q2M329 555 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
SPARC-209ENST00000539687 MTMR14Q8NCE2 650 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 PIBF1Q8WXW3 757 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
SPARC-209ENST00000539687 CCDC47Q96A33 483 aaKnown RBP11.54□□□□□ -0.56
SPARC-209ENST00000539687 PIM2Q9P1W9 311 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 SERTAD1Q9UHV2 236 aa11.54□□□□□ -0.56
SPARC-209ENST00000539687 ZNRF3Q9ULT6 936 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms