RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 SYNPO2Q9UMS6 1093 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 ZNF536O15090 1300 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 TNKSO95271 1327 aa12.62□□□□□ -0.39
HMGA2-209ENST00000539662 CDC45O75419 566 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 GOLGA8HP0CJ92 632 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 PDHBP11177 359 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 CCL5P13501 91 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 STAT3P40763 770 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 RGS19P49795 217 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 ANTXR2P58335 489 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 CCNA1P78396 465 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 GRB14Q14449 540 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 NECTIN1Q15223 517 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 SEC23AQ15436 765 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 CCDC96Q2M329 555 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 RIOX2Q8IUF8 465 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
HMGA2-209ENST00000539662 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 PRPF38AQ8NAV1 312 aaKnown RBP12.61□□□□□ -0.39
HMGA2-209ENST00000539662 SLAIN1Q8ND83 568 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 SLC38A10Q9HBR0 1119 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 ANO2Q9NQ90 1003 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 BIN2Q9UBW5 565 aaPredicted RBP12.61□□□□□ -0.39
HMGA2-209ENST00000539662 FEM1BQ9UK73 627 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 PRR12Q9ULL5 1215 aa12.61□□□□□ -0.39
HMGA2-209ENST00000539662 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
HMGA2-209ENST00000539662 SLC15A5A6NIM6 579 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 SLC27A2O14975 620 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 PGK2P07205 417 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 ADORA2AP29274 412 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 ERICH6BQ5W0A0 696 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 CREB3L3Q68CJ9 461 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
HMGA2-209ENST00000539662 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 SHCBP1Q8NEM2 672 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 ANKS1AQ92625 1134 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 AGBL1Q96MI9 1066 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 TTC14Q96N46 770 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 KRT23Q9C075 422 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
HMGA2-209ENST00000539662 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
HMGA2-209ENST00000539662 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 SNHG28P0DPA3 235 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 STAT2P52630 851 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 KIAA1211Q6ZU35 1233 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 MB21D2Q8IYB1 491 aaPredicted RBP12.59□□□□□ -0.39
HMGA2-209ENST00000539662 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 PNMA1Q8ND90 353 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 DCAF4Q8WV16 495 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 RNF208Q9H0X6 261 aa12.59□□□□□ -0.39
HMGA2-209ENST00000539662 ZBED4O75132 1171 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 IGHA2P01877 340 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 HMGCRP04035 888 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
HMGA2-209ENST00000539662 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
HMGA2-209ENST00000539662 CYP2C19P33261 490 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 RGS2P41220 211 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 CACNB2Q08289 660 aaPredicted RBP12.58□□□□□ -0.4
HMGA2-209ENST00000539662 IKQ13123 557 aaPredicted RBP12.58□□□□□ -0.4
HMGA2-209ENST00000539662 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 STAG2Q8N3U4 1231 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 TRPV1Q8NER1 839 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 SOCS4Q8WXH5 440 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 APBA2Q99767 749 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 TEX13BQ9BXU2 312 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 UBA5Q9GZZ9 404 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 MROH8Q9H579 483 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 CNNM2Q9H8M5 875 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
HMGA2-209ENST00000539662 LCTP09848 1927 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 ATP2A1O14983 1001 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 PLA2G6O60733 806 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 SLC25A27O95847 323 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 HOXC6P09630 235 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
HMGA2-209ENST00000539662 ZKSCAN1P17029 563 aaPredicted RBP12.57□□□□□ -0.4
HMGA2-209ENST00000539662 SLC35G1Q2M3R5 365 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 MAP3K21Q5TCX8 1036 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 SYDE2Q5VT97 1194 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 NCOA7Q8NI08 942 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 IGDCC4Q8TDY8 1250 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 MMP19Q99542 508 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 UBAC1Q9BSL1 405 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 KAT14Q9H8E8 782 aa12.57□□□□□ -0.4
HMGA2-209ENST00000539662 DDX49Q9Y6V7 483 aaKnown RBP12.57□□□□□ -0.4
HMGA2-209ENST00000539662 IVNS1ABPQ9Y6Y0 642 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms