RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PCDHA8Q9Y5H6 950 aa15.9■□□□□ 0.14
UBE3B-210ENST00000539599 COL5A3P25940 1745 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-210ENST00000539599 KLK7P49862 253 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 PAK1Q13153 545 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 USP17L2Q6R6M4 530 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 FCHSD1Q86WN1 690 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 FAM53CQ9NYF3 392 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 KCNJ18B7U540 433 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 MYO1BO43795 1136 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
UBE3B-210ENST00000539599 COPB1P53618 953 aaKnown RBP15.89■□□□□ 0.13
UBE3B-210ENST00000539599 KCNJ12Q14500 433 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 IRF2BP1Q8IU81 584 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 MKRN1Q9UHC7 482 aaKnown RBP15.89■□□□□ 0.13
UBE3B-210ENST00000539599 KIAA1551Q9HCM1 1747 aa15.89■□□□□ 0.13
UBE3B-210ENST00000539599 GYS2P54840 703 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 TERF2Q15554 542 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 SLC35F6Q8N357 371 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 TMEM47Q9BQJ4 181 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-210ENST00000539599 CCDC194A0A1B0GVG4 234 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 EIF6P56537 245 aaKnown RBP15.88■□□□□ 0.13
UBE3B-210ENST00000539599 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 PARD6BQ9BYG5 372 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 UBA5Q9GZZ9 404 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-210ENST00000539599 PCDHA4Q9UN74 947 aa15.88■□□□□ 0.13
UBE3B-210ENST00000539599 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
UBE3B-210ENST00000539599 EFCAB8A8MWE9 144 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-210ENST00000539599 ZRANB2O95218 330 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE3B-210ENST00000539599 UBXN1Q04323 297 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 TCP11X2Q5H9J9 407 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 PANX2Q96RD6 677 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 DNAJC5Q9H3Z4 198 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 SUGCTQ9HAC7 445 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 IRS2Q9Y4H2 1338 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 FILIP1LQ4L180 1135 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 NGLY1Q96IV0 654 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 DISC1Q9NRI5 854 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 ABHD10Q9NUJ1 306 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 KRT9P35527 623 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 TMEM260Q9NX78 707 aa15.87■□□□□ 0.13
UBE3B-210ENST00000539599 SBK1Q52WX2 424 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 ZNF658Q5TYW1 1059 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-210ENST00000539599 BARGINQ6ZT62 677 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 GJA10Q969M2 543 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 COL22A1Q8NFW1 1626 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-210ENST00000539599 STXBP3O00186 592 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 ENC1O14682 589 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 TBC1D8O95759 1140 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 FCER1AP12319 257 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 RASA1P20936 1047 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 KIF5BP33176 963 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 BMS1Q14692 1282 aaKnown RBP15.86■□□□□ 0.13
UBE3B-210ENST00000539599 DTHD1Q6ZMT9 781 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 ANKRD2Q9GZV1 360 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 RWDD2AQ9UIY3 292 aa15.86■□□□□ 0.13
UBE3B-210ENST00000539599 RTCBQ9Y3I0 505 aaKnown RBP15.86■□□□□ 0.13
UBE3B-210ENST00000539599 FRMPD2Q68DX3 1309 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 LAMB1P07942 1786 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 M0R2N6 131 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 SEMA3EO15041 775 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 BMP15O95972 392 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 RSRC2Q7L4I2 434 aaKnown RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 NYXQ9GZU5 481 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 TTC26A0AVF1 554 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 KLRF2D3W0D1 207 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 CCNT1O60563 726 aaKnown RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 RHOXF2BP0C7M4 288 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 BTDP43251 543 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 GPSM2P81274 684 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 GRM4Q14833 912 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 TXNRD1Q16881 649 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 KIF4BQ2VIQ3 1234 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 CC2D1AQ6P1N0 951 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 RHOXF2Q9BQY4 288 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 LIMA1Q9UHB6 759 aaKnown RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 REXO2Q9Y3B8 237 aaKnown RBP15.85■□□□□ 0.13
UBE3B-210ENST00000539599 CNTNAP4Q9C0A0 1308 aa15.85■□□□□ 0.13
UBE3B-210ENST00000539599 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-210ENST00000539599 F8W031 263 aaPredicted RBP15.84■□□□□ 0.13
UBE3B-210ENST00000539599 KLRC4O43908 158 aa15.84■□□□□ 0.13
UBE3B-210ENST00000539599 PLCG1P19174 1290 aa15.84■□□□□ 0.13
UBE3B-210ENST00000539599 UBA7P41226 1012 aa15.84■□□□□ 0.13
UBE3B-210ENST00000539599 PNKPQ96T60 521 aa15.84■□□□□ 0.13
UBE3B-210ENST00000539599 B4DLN1 442 aa15.84■□□□□ 0.13
UBE3B-210ENST00000539599 PCP11498 1178 aaKnown RBP15.84■□□□□ 0.13
UBE3B-210ENST00000539599 TECP42680 631 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms