RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 FZD9O00144 591 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 SNHG28P0DPA3 235 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 EEF2P13639 858 aaKnown RBP19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 NOM1Q5C9Z4 860 aaKnown RBP19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 ADALQ6DHV7 355 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 TYW1BQ6NUM6 668 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 SPZ1Q9BXG8 430 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 GTPBP4Q9BZE4 634 aaKnown RBP19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 CLSTN2Q9H4D0 955 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 ARFGEF1Q9Y6D6 1849 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 MYO1BO43795 1136 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 ATP2B1P20020 1258 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 ABCB5Q2M3G0 1257 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 SIAH1Q8IUQ4 282 aa19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCDHB17P-201ENST00000539533 GMPSP49915 693 aaPredicted RBP19.53■□□□□ 0.72
PCDHB17P-201ENST00000539533 WWC2Q6AWC2 1192 aa19.53■□□□□ 0.72
PCDHB17P-201ENST00000539533 HOMER1Q86YM7 354 aa19.53■□□□□ 0.72
PCDHB17P-201ENST00000539533 FHDC1Q9C0D6 1143 aaPredicted RBP19.53■□□□□ 0.72
PCDHB17P-201ENST00000539533 KANSL2Q9H9L4 492 aa19.53■□□□□ 0.72
PCDHB17P-201ENST00000539533 GPCPD1Q9NPB8 672 aa19.53■□□□□ 0.72
PCDHB17P-201ENST00000539533 ZNF280AP59817 542 aaPredicted RBP19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 RILPL1Q5EBL4 403 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 FKBP1CQ5VVH2 108 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 CCDC186Q7Z3E2 898 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 HEATR3Q7Z4Q2 680 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 TNFRSF25Q93038 417 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 BRMS1Q9HCU9 246 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 PCDHB6Q9Y5E3 794 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 MYH4Q9Y623 1939 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 AXDND1Q5T1B0 1012 aaPredicted RBP19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 TMEM179Q6ZVK1 233 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 FSIP1Q8NA03 581 aa19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 HERC5Q9UII4 1024 aaKnown RBP19.52■□□□□ 0.72
PCDHB17P-201ENST00000539533 GH2P01242 217 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 RPS12P25398 132 aaKnown RBP19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 SNW1Q13573 536 aaKnown RBP19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 ASPRV1Q53RT3 343 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 ARHGAP27Q6ZUM4 889 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 SAMD7Q7Z3H4 446 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 MICALL2Q8IY33 904 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 PIGSQ96S52 555 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 SH3GLB2Q9NR46 395 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 NYAP2Q9P242 653 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 A0A1B0GVL5 298 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 RAD21O60216 631 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 ZNF75DP51815 510 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 ICA1Q05084 483 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 ZNF543Q08ER8 600 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 TTBK2Q6IQ55 1244 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 MIGA2Q7L4E1 593 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 PLA2G4DQ86XP0 818 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 MKL1Q969V6 931 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 RIOX1Q9H6W3 641 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 BARHL2Q9NY43 387 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 ZNF541Q9H0D2 1346 aa19.51■□□□□ 0.71
PCDHB17P-201ENST00000539533 A0A1W2PQ27 194 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 A0A1W2PQ64 194 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 A0A1W2PQD8 194 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 CTIFO43310 598 aaKnown RBP19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 KCTD1Q719H9 257 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 FAM83AQ86UY5 434 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 DRC7Q8IY82 874 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 ENGASEQ8NFI3 743 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 MRPS27Q92552 414 aaKnown RBP19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 RRP36Q96EU6 259 aaKnown RBP19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 TRIM5Q9C035 493 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 CNOT7Q9UIV1 285 aaKnown RBP19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 STXBP3O00186 592 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 PPP6R2O75170 966 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 LRMPQ12912 555 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 CCDC73Q6ZRK6 1079 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 PDCL2Q8N4E4 241 aa19.5■□□□□ 0.71
PCDHB17P-201ENST00000539533 WNT7AO00755 349 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 TBC1D10BQ4KMP7 808 aaPredicted RBP19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 ANKRD7Q92527 254 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 CLIC6Q96NY7 704 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 PGAP2Q9UHJ9 254 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 NRBP1Q9UHY1 535 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 ASTN2O75129 1339 aaPredicted RBP19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 CALML3P27482 149 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 FAM160A1Q05DH4 1040 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 CCDC96Q2M329 555 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 BLIDQ8IZY5 108 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 DPF2Q92785 391 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 PCDHA4Q9UN74 947 aa19.49■□□□□ 0.71
PCDHB17P-201ENST00000539533 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 SLC16A2P36021 539 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 ZNF165P49910 485 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 NDUFA8P51970 172 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 PIK3AP1Q6ZUJ8 805 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 RASGRP4Q8TDF6 673 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 SEC63Q9UGP8 760 aaKnown RBP19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 KIF20AO95235 890 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 RASA3Q14644 834 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 JMYQ8N9B5 988 aa19.48■□□□□ 0.71
PCDHB17P-201ENST00000539533 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms