RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CASP8AP2Q9UKL3 1982 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 KLF18A0A0U1RQI7 1052 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 VWA5AO00534 786 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 PLEKHA8P1O95397 391 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 OSBPP22059 807 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 CDC27P30260 824 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 FUT2Q10981 343 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 ST3GAL1Q11201 340 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 TMEM132BQ14DG7 1078 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
CCDC42-202ENST00000539522 OTUD7BQ6GQQ9 843 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 SLF1Q9BQI6 1058 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 ARHGAP39Q9C0H5 1083 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 ZFYVE28Q9HCC9 887 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 PDRG1Q9NUG6 133 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 MORF4L1Q9UBU8 362 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 FEM1BQ9UK73 627 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 ZNF214Q9UL59 606 aaPredicted RBP15.19■□□□□ 0.02
CCDC42-202ENST00000539522 TPCN1Q9ULQ1 816 aa15.19■□□□□ 0.02
CCDC42-202ENST00000539522 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
CCDC42-202ENST00000539522 LCTP09848 1927 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 DOCK3Q8IZD9 2030 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 ERICH2A1L162 156 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 GPR25O00155 361 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 DDAH1O94760 285 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
CCDC42-202ENST00000539522 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.02
CCDC42-202ENST00000539522 CCDC96Q2M329 555 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
CCDC42-202ENST00000539522 SRBD1Q8N5C6 995 aaKnown RBP15.18■□□□□ 0.02
CCDC42-202ENST00000539522 KIFC2Q96AC6 838 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 MTMR8Q96EF0 704 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 MAP3K14Q99558 947 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 SLC38A10Q9HBR0 1119 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
CCDC42-202ENST00000539522 MYH6P13533 1939 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
CCDC42-202ENST00000539522 DTNBO60941 627 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
CCDC42-202ENST00000539522 NEK4P51957 841 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 STAT2P52630 851 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 ASPRV1Q53RT3 343 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 NOM1Q5C9Z4 860 aaKnown RBP15.17■□□□□ 0.02
CCDC42-202ENST00000539522 CATIPQ7Z7H3 387 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 MICU3Q86XE3 530 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 TMTC2Q8N394 836 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 PRPF38AQ8NAV1 312 aaKnown RBP15.17■□□□□ 0.02
CCDC42-202ENST00000539522 FANCBQ8NB91 859 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 ZNF296Q8WUU4 475 aaPredicted RBP15.17■□□□□ 0.02
CCDC42-202ENST00000539522 PORCNQ9H237 461 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 RANBP17Q9H2T7 1088 aaKnown RBP15.17■□□□□ 0.02
CCDC42-202ENST00000539522 JMJD4Q9H9V9 463 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 RIPK3Q9Y572 518 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 CENPFP49454 3210 aa15.17■□□□□ 0.02
CCDC42-202ENST00000539522 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 KLRF2D3W0D1 207 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
CCDC42-202ENST00000539522 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 ERVK-24P63145 666 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 NTRK3Q16288 839 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 FAM110CQ1W6H9 321 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 GPATCH4Q5T3I0 446 aaKnown RBP15.16■□□□□ 0.02
CCDC42-202ENST00000539522 SYDE2Q5VT97 1194 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 SAMD1Q6SPF0 538 aaPredicted RBP15.16■□□□□ 0.02
CCDC42-202ENST00000539522 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 ADGRF4Q8IZF3 695 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 SMCR8Q8TEV9 937 aaPredicted RBP15.16■□□□□ 0.02
CCDC42-202ENST00000539522 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 RIOX1Q9H6W3 641 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 HOXC10Q9NYD6 342 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 SLC12A7Q9Y666 1083 aa15.16■□□□□ 0.02
CCDC42-202ENST00000539522 ZBTB43O43298 467 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 ADD1P35611 737 aaKnown RBP15.15■□□□□ 0.02
CCDC42-202ENST00000539522 GCLCP48506 637 aaPredicted RBP15.15■□□□□ 0.02
CCDC42-202ENST00000539522 LBX1P52954 281 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 TMTC3Q6ZXV5 915 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 FAM160B2Q86V87 743 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 PAGR1Q9BTK6 254 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 MOV10L1Q9BXT6 1211 aaKnown RBP15.15■□□□□ 0.02
CCDC42-202ENST00000539522 NCOA5Q9HCD5 579 aaKnown RBP15.15■□□□□ 0.02
CCDC42-202ENST00000539522 RABGAP1Q9Y3P9 1069 aa15.15■□□□□ 0.02
CCDC42-202ENST00000539522 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
CCDC42-202ENST00000539522 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
CCDC42-202ENST00000539522 GOLGA8BA8MQT2 603 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 ATP2A1O14983 1001 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 LACTBP83111 547 aaPredicted RBP15.14■□□□□ 0.01
CCDC42-202ENST00000539522 ME3Q16798 604 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 CD99L2Q8TCZ2 262 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 CHURC1Q8WUH1 139 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 SHISA4Q96DD7 197 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 AGBL1Q96MI9 1066 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
CCDC42-202ENST00000539522 SPATC1LQ9H0A9 340 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 EFCC1Q9HA90 598 aa15.14■□□□□ 0.01
CCDC42-202ENST00000539522 RAVER2Q9HCJ3 691 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms