RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 ZNF333Q96JL9 665 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 NYAP2Q9P242 653 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 ZBTB21Q9ULJ3 1066 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
RTN4IP1-204ENST00000539449 FRMPD2Q68DX3 1309 aaPredicted RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 VPS37CA5D8V6 355 aaPredicted RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 CYTH3O43739 400 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 DHX16O60231 1041 aaKnown RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 ALDH1A1P00352 501 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 ZSCAN22P10073 491 aaPredicted RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 PDHBP11177 359 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 HMGN5P82970 282 aaKnown RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 ICA1Q05084 483 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 SSRP1Q08945 709 aaKnown RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 PKN1Q16512 942 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 TTBK2Q6IQ55 1244 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 FAM184AQ8NB25 1140 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 CD99L2Q8TCZ2 262 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 DPF3Q92784 378 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 ERO1AQ96HE7 468 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 MAP3K14Q99558 947 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 UBA5Q9GZZ9 404 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 KANSL2Q9H9L4 492 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 RBM28Q9NW13 759 aaKnown RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 ZNF112Q9UJU3 913 aa10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 V9GY48 417 aaPredicted RBP10.65□□□□□ -0.7
RTN4IP1-204ENST00000539449 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 PRPF3O43395 683 aaKnown RBP10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 USP2O75604 605 aaPredicted RBP10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 SNHG28P0DPA3 235 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 MKRN4PQ13434 485 aaPredicted RBP10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 PRKG1Q13976 671 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 FOXD4L6Q3SYB3 417 aaPredicted RBP10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 FAM173BQ6P4H8 233 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 FOXD4L3Q6VB84 417 aaPredicted RBP10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 FERMT3Q86UX7 667 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 PIBF1Q8WXW3 757 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 NUP88Q99567 741 aaPredicted RBP10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 ALG1Q9BT22 464 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 EFCC1Q9HA90 598 aa10.64□□□□□ -0.71
RTN4IP1-204ENST00000539449 CCDC196A0A1B0GTZ2 297 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 A0A1W2PPC1 479 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 KLRF2D3W0D1 207 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 F5H6K3 240 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 ADAMTS3O15072 1205 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 F13A1P00488 732 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 KLRC3Q07444 240 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 ZNF543Q08ER8 600 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 RESTQ13127 1097 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 PPP2R5BQ15173 497 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 NFKBIBQ15653 356 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 SLFN13Q68D06 897 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 KRT40Q6A162 431 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 CPLX2Q6PUV4 134 aaKnown RBP10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 ZKSCAN4Q969J2 545 aaPredicted RBP10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 RNF26Q9BY78 433 aaPredicted RBP10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 ZNF341Q9BYN7 854 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 PRDM6Q9NQX0 595 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 PPP2R3BQ9Y5P8 575 aa10.63□□□□□ -0.71
RTN4IP1-204ENST00000539449 SMCHD1A6NHR9 2005 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 KIF28PB7ZC32 967 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 CTNND1O60716 968 aaKnown RBP10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 CDKL5O76039 1030 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 BAG4O95429 457 aaKnown RBP10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 NDUFB10O96000 172 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 KIF5BP33176 963 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 SLC16A2P36021 539 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 DCAF15Q66K64 600 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 FBXO18Q8NFZ0 1043 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 C8orf76Q96K31 380 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 VAT1LQ9HCJ6 419 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 KCNJ14Q9UNX9 436 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 STXBP5LQ9Y2K9 1186 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 TMX2Q9Y320 296 aa10.62□□□□□ -0.71
RTN4IP1-204ENST00000539449 H3BQV1 296 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 RAD21O60216 631 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 DEXIO95424 95 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 ASNSP08243 561 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 PDCP20941 246 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 GNAQP50148 359 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 CAP1Q01518 475 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 CCDC96Q2M329 555 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 SUPT20HL1Q3ZLR7 823 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 IFNL1Q8IU54 200 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 SPICE1Q8N0Z3 855 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 GMCL1P1Q8NEA9 526 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 PIGSQ96S52 555 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 WRNIP1Q96S55 665 aa10.61□□□□□ -0.71
RTN4IP1-204ENST00000539449 RIOX1Q9H6W3 641 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms