RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 B8ZZF3 427 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 HRKO00198 91 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 PRRG2O14669 202 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 SIGLEC6O43699 453 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 CLEC3AO75596 197 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 CCNFP41002 786 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 CTSWP56202 376 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 APOBRQ0VD83 1088 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 LDLRAD1Q5T700 205 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 HS2ST1Q7LGA3 356 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 GFOD1Q9NXC2 390 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 MBD1Q9UIS9 605 aaPredicted RBP9.3□□□□□ -0.92
CCDC7-209ENST00000539197 NCANO14594 1321 aa9.3□□□□□ -0.92
CCDC7-209ENST00000539197 NME1P15531 152 aaKnown RBP9.29□□□□□ -0.92
CCDC7-209ENST00000539197 CTSKP43235 329 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 CEBPAP49715 358 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-209ENST00000539197 EPHB3P54753 998 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 SRSF3P84103 164 aaKnown RBP9.29□□□□□ -0.92
CCDC7-209ENST00000539197 TCERG1LQ5VWI1 586 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 C20orf173Q96LM9 149 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 SLC6A18Q96N87 628 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 SIRT5Q9NXA8 310 aa9.29□□□□□ -0.92
CCDC7-209ENST00000539197 PNLIPP16233 465 aa9.28□□□□□ -0.92
CCDC7-209ENST00000539197 HOXA5P20719 270 aa9.28□□□□□ -0.92
CCDC7-209ENST00000539197 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
CCDC7-209ENST00000539197 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
CCDC7-209ENST00000539197 MKRN2Q9H000 416 aaKnown RBP9.28□□□□□ -0.92
CCDC7-209ENST00000539197 ZCCHC4Q9H5U6 513 aa9.28□□□□□ -0.92
CCDC7-209ENST00000539197 PARD6AQ9NPB6 346 aa9.28□□□□□ -0.92
CCDC7-209ENST00000539197 BMP7P18075 431 aa9.27□□□□□ -0.93
CCDC7-209ENST00000539197 VIPR1P32241 457 aa9.27□□□□□ -0.93
CCDC7-209ENST00000539197 RTP1P59025 263 aa9.27□□□□□ -0.93
CCDC7-209ENST00000539197 TMEM151BQ8IW70 566 aa9.27□□□□□ -0.93
CCDC7-209ENST00000539197 REXO1Q8N1G1 1221 aaKnown RBP9.27□□□□□ -0.93
CCDC7-209ENST00000539197 TNFRSF10DQ9UBN6 386 aa9.27□□□□□ -0.93
CCDC7-209ENST00000539197 GPR55Q9Y2T6 319 aaPredicted RBP9.27□□□□□ -0.93
CCDC7-209ENST00000539197 PI3P19957 117 aa9.26□□□□□ -0.93
CCDC7-209ENST00000539197 ZNF165P49910 485 aa9.26□□□□□ -0.93
CCDC7-209ENST00000539197 LRRFIP1Q32MZ4 808 aaKnown RBP9.26□□□□□ -0.93
CCDC7-209ENST00000539197 NKD1Q969G9 470 aa9.26□□□□□ -0.93
CCDC7-209ENST00000539197 FCRL2Q96LA5 508 aaPredicted RBP9.26□□□□□ -0.93
CCDC7-209ENST00000539197 SIGLEC10Q96LC7 697 aa9.26□□□□□ -0.93
CCDC7-209ENST00000539197 IRAK3Q9Y616 596 aa9.26□□□□□ -0.93
CCDC7-209ENST00000539197 FADS2P1A8MWK0 482 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 ACRP10323 421 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 ENDOUP21128 410 aaKnown RBP9.25□□□□□ -0.93
CCDC7-209ENST00000539197 HSF5Q4G112 596 aaPredicted RBP9.25□□□□□ -0.93
CCDC7-209ENST00000539197 OLFML2BQ68BL8 750 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 SLITRK4Q8IW52 837 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 BCL11AQ9H165 835 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 CNTD2Q9H8S5 307 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 ERVK13-1Q9NX77 482 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 FBXL21Q9UKT6 434 aa9.25□□□□□ -0.93
CCDC7-209ENST00000539197 MEIS3P2A8K0S8 358 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 C9IYK1 514 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 TNFRSF10CO14798 259 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 BUD31P41223 144 aaPredicted RBP9.24□□□□□ -0.93
CCDC7-209ENST00000539197 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
CCDC7-209ENST00000539197 GALNT18Q6P9A2 607 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 CDADC1Q9BWV3 514 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 NT5C1AQ9BXI3 368 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 TAF6LQ9Y6J9 622 aa9.24□□□□□ -0.93
CCDC7-209ENST00000539197 ADAMTS20P59510 1910 aa9.23□□□□□ -0.93
CCDC7-209ENST00000539197 WTIPA6NIX2 430 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-209ENST00000539197 ABLIM1O14639 778 aa9.23□□□□□ -0.93
CCDC7-209ENST00000539197 YBX1P67809 324 aaKnown RBP9.23□□□□□ -0.93
CCDC7-209ENST00000539197 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
CCDC7-209ENST00000539197 EPB41L4AQ9HCS5 686 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-209ENST00000539197 AP5S1Q9NUS5 200 aa9.23□□□□□ -0.93
CCDC7-209ENST00000539197 PCDHB12Q9Y5F1 795 aa9.23□□□□□ -0.93
CCDC7-209ENST00000539197 N4BP3O15049 544 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 SHOXO15266 292 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 TRIM13O60858 407 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 ARL4AP40617 200 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 ERVFRD-1P60508 538 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 TMEM52Q8NDY8 209 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 SPON2Q9BUD6 331 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 KLHL14Q9P2G3 628 aa9.22□□□□□ -0.93
CCDC7-209ENST00000539197 ZNF205O95201 554 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 MPOP05164 745 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 VAV1P15498 845 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 BMP8BP34820 402 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 CDR1P51861 262 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 LAPTM5Q13571 262 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 VMACQ2NL98 169 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 TDRD10Q5VZ19 366 aaKnown RBP9.21□□□□□ -0.94
CCDC7-209ENST00000539197 SLCO6A1Q86UG4 719 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 KIAA0825Q8IV33 1275 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 MARCH10Q8NA82 808 aaPredicted RBP9.21□□□□□ -0.94
CCDC7-209ENST00000539197 RELTQ969Z4 430 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 KCNC2Q96PR1 638 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 KRTAP4-11Q9BYQ6 195 aa9.21□□□□□ -0.94
CCDC7-209ENST00000539197 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
CCDC7-209ENST00000539197 PRKCAP17252 672 aa9.2□□□□□ -0.94
CCDC7-209ENST00000539197 RTP2Q5QGT7 225 aa9.2□□□□□ -0.94
CCDC7-209ENST00000539197 PRR13Q9NZ81 148 aa9.2□□□□□ -0.94
CCDC7-209ENST00000539197 TMEM62Q0P6H9 643 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms