RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 CCDC84Q86UT8 332 aaPredicted RBP17.77■□□□□ 0.44
VAMP1-207ENST00000539047 DNAJC5GQ8N7S2 189 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 VAT1LQ9HCJ6 419 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
VAMP1-207ENST00000539047 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 FZD1Q9UP38 647 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 SNCAIPQ9Y6H5 919 aa17.77■□□□□ 0.44
VAMP1-207ENST00000539047 BAZ2BQ9UIF8 2168 aaKnown RBP17.77■□□□□ 0.43
VAMP1-207ENST00000539047 LOC285556D6RIA3 1793 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 PTMSP20962 102 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 BACE1P56817 501 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-207ENST00000539047 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 ERO1BQ86YB8 467 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 ADGRF4Q8IZF3 695 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 C2orf69Q8N8R5 385 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 AIFM3Q96NN9 605 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 NUP88Q99567 741 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-207ENST00000539047 TANGO6Q9C0B7 1094 aa17.76■□□□□ 0.43
VAMP1-207ENST00000539047 PNMA6FA0A0J9YX94 578 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 hCG_1642624A0A1W2PR95 340 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 CYTH3O43739 400 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 MMP1P03956 469 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 SLC16A2P36021 539 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 NAPAP54920 295 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 NLRP5P59047 1200 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 PPATQ06203 517 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 PKN1Q16512 942 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 CSPP1Q1MSJ5 1256 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 TTBK2Q6IQ55 1244 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 GALNT17Q6IS24 598 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 DLK2Q6UY11 383 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 PIGSQ96S52 555 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 ELP3Q9H9T3 547 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 ZDHHC9Q9Y397 364 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 CTDP1Q9Y5B0 961 aaPredicted RBP17.75■□□□□ 0.43
VAMP1-207ENST00000539047 PARP14Q460N5 1801 aa17.75■□□□□ 0.43
VAMP1-207ENST00000539047 DDX11L8A8MPP1 907 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 TRAF5O00463 557 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 ZBTB5O15062 677 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 PLA2G6O60733 806 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 NCLP19338 710 aaKnown RBP17.74■□□□□ 0.43
VAMP1-207ENST00000539047 KRT2P35908 639 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 CDC37Q16543 378 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-207ENST00000539047 BTNL9Q6UXG8 535 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 C12orf42Q96LP6 360 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 ZNF396Q96N95 335 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-207ENST00000539047 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 JMJD4Q9H9V9 463 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 GBA2Q9HCG7 927 aaPredicted RBP17.74■□□□□ 0.43
VAMP1-207ENST00000539047 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
VAMP1-207ENST00000539047 SPDYE5A6NIY4 337 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
VAMP1-207ENST00000539047 VCAM1P19320 739 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 KRT85P78386 507 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 RESTQ13127 1097 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 WWC2Q6AWC2 1192 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 BICD2Q8TD16 824 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
VAMP1-207ENST00000539047 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 PHF20Q9BVI0 1012 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 C6orf50Q9HD87 102 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 AFG3L2Q9Y4W6 797 aa17.73■□□□□ 0.43
VAMP1-207ENST00000539047 RBBP6Q7Z6E9 1792 aaKnown RBP17.73■□□□□ 0.43
VAMP1-207ENST00000539047 BAG4O95429 457 aaKnown RBP17.72■□□□□ 0.43
VAMP1-207ENST00000539047 FDX1P10109 184 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 GNA11P29992 359 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 HMGCS2P54868 508 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-207ENST00000539047 PPIL2Q13356 520 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
VAMP1-207ENST00000539047 KIFC2Q96AC6 838 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 SLC10A4Q96EP9 437 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 SLF1Q9BQI6 1058 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 GLT8D2Q9H1C3 349 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-207ENST00000539047 RPAP3Q9H6T3 665 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-207ENST00000539047 PRR12Q9ULL5 1215 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 KCNJ14Q9UNX9 436 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 TCHHQ07283 1943 aa17.72■□□□□ 0.43
VAMP1-207ENST00000539047 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 STXBP3O00186 592 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 CXCL11O14625 94 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 FLOT1O75955 427 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 QRICH1Q2TAL8 776 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
VAMP1-207ENST00000539047 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 FBXO11Q86XK2 927 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 PRPF38AQ8NAV1 312 aaKnown RBP17.71■□□□□ 0.43
VAMP1-207ENST00000539047 MTMR8Q96EF0 704 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
VAMP1-207ENST00000539047 CFAP45Q9UL16 551 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms