RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 GPC2Q8N158 579 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 DHX58Q96C10 678 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 GSDMAQ96QA5 445 aa16.51■□□□□ 0.23
CDCA3-207ENST00000538862 SAMSN1Q9NSI8 373 aaKnown RBP16.51■□□□□ 0.23
CDCA3-207ENST00000538862 YDJCA8MPS7 323 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 RAD17O75943 681 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 ERCC6LQ2NKX8 1250 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 PAGE5Q96GU1 130 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 EPSTI1Q96J88 318 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
CDCA3-207ENST00000538862 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
CDCA3-207ENST00000538862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDCA3-207ENST00000538862 A0A087X0B3 334 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 SMIM22K7EJ46 135 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 TRAPPC10P48553 1259 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 CXCL9Q07325 125 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 GOLGA8FQ08AF8 430 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 GOLGA8DPQ0D2H9 430 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 EARS2Q5JPH6 523 aaKnown RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 TRMT44Q8IYL2 757 aaKnown RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 ZNF384Q8TF68 577 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 PYM1Q9BRP8 204 aaKnown RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 XDHP47989 1333 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 CYP2D7A0A087X1C5 515 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 PRDM1O75626 825 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 ATP2C1P98194 919 aaPredicted RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 DPYDQ12882 1025 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 CUL4BQ13620 913 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 NPY5RQ15761 445 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 HSP90AA4PQ58FG1 418 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 NSUN4Q96CB9 384 aaKnown RBP16.49■□□□□ 0.23
CDCA3-207ENST00000538862 CTAGE1Q96RT6 745 aa16.49■□□□□ 0.23
CDCA3-207ENST00000538862 SCN9AQ15858 1988 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 CNTNAP5Q8WYK1 1306 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 USP17L12C9JPN9 530 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 USP17L21D6R901 530 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 TPM1P09493 284 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 CTCFLQ8NI51 663 aaPredicted RBP16.48■□□□□ 0.23
CDCA3-207ENST00000538862 IPO4Q8TEX9 1081 aaKnown RBP16.48■□□□□ 0.23
CDCA3-207ENST00000538862 PANX2Q96RD6 677 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 EYA3Q99504 573 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 CRNKL1Q9BZJ0 848 aaKnown RBP16.48■□□□□ 0.23
CDCA3-207ENST00000538862 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 ATP8A2Q9NTI2 1148 aa16.48■□□□□ 0.23
CDCA3-207ENST00000538862 ZBTB22O15209 634 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 AFMP43652 599 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 NT5C2P49902 561 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 ADKP55263 362 aaKnown RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 APTXQ7Z2E3 356 aaKnown RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 UBXN4Q92575 508 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 NAA15Q9BXJ9 866 aaKnown RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 HACL1Q9UJ83 578 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 IQCA1LA6NCM1 817 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 EFCAB8A8MWE9 144 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 AKR1B15C9JRZ8 316 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 FANCGO15287 622 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 ECE2O60344 883 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 URI1O94763 535 aaPredicted RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 SCNN1DP51172 638 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 ZNF174Q15697 407 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 CDKAL1Q5VV42 579 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
CDCA3-207ENST00000538862 LRRN4CLQ8ND94 238 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 MNS1Q8NEH6 495 aa16.47■□□□□ 0.23
CDCA3-207ENST00000538862 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 hCG_1642624A0A1W2PR95 340 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 PPP1R3GB7ZBB8 358 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 KIF20AO95235 890 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 CASQ1P31415 396 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 EPS15P42566 896 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 MECOMQ03112 1051 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 PTGDRQ13258 359 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 BMS1Q14692 1282 aaKnown RBP16.46■□□□□ 0.23
CDCA3-207ENST00000538862 ARHGAP29Q52LW3 1261 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 CIAPIN1Q6FI81 312 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 IQUBQ8NA54 791 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 DCP1AQ9NPI6 582 aaPredicted RBP16.46■□□□□ 0.23
CDCA3-207ENST00000538862 LAMB1P07942 1786 aa16.46■□□□□ 0.23
CDCA3-207ENST00000538862 MYH13Q9UKX3 1938 aa16.46■□□□□ 0.22
CDCA3-207ENST00000538862 TADA3O75528 432 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 SCG2P13521 617 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 CD44P16070 742 aaKnown RBP16.45■□□□□ 0.22
CDCA3-207ENST00000538862 HSPA6P17066 643 aa16.45■□□□□ 0.22
CDCA3-207ENST00000538862 ATP2B4P23634 1241 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms