RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 MRIQ9BWK5 157 aa7.52□□□□□ -1.21
USP28-206ENST00000538224 ZMYND12Q9H0C1 365 aa7.52□□□□□ -1.21
USP28-206ENST00000538224 GLT8D2Q9H1C3 349 aa7.52□□□□□ -1.21
USP28-206ENST00000538224 EHD4Q9H223 541 aa7.52□□□□□ -1.21
USP28-206ENST00000538224 NFE2L3Q9Y4A8 694 aa7.52□□□□□ -1.21
USP28-206ENST00000538224 A0A087WWV3 80 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 hCG_1642624A0A1W2PR95 340 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 FAM205CA6NFA0 338 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 ZSCAN12O43309 604 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 NPM3O75607 178 aaKnown RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 TPM1P09493 284 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 PRR29P0C7W0 189 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 MCM7P33993 719 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 STAT6P42226 847 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 GRIN1Q05586 938 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 GABPAQ06546 454 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 DPYDQ12882 1025 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 STIM1Q13586 685 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 NONOQ15233 471 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP28-206ENST00000538224 PTPN14Q15678 1187 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 GRIK5Q16478 980 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 GRIPAP1Q4V328 841 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 EARS2Q5JPH6 523 aaKnown RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 SPECC1LQ69YQ0 1117 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 STYK1Q6J9G0 422 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 POTEHQ6S545 545 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 PODNQ7Z5L7 613 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 CCAR2Q8N163 923 aaKnown RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 C17orf53Q8N3J3 647 aaPredicted RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 STAG2Q8N3U4 1231 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 CEP95Q96GE4 821 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 CCDC17Q96LX7 622 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 C16orf45Q96MC5 204 aaPredicted RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 GPR101Q96P66 508 aaPredicted RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 RAB34Q9BZG1 259 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 CCSER1Q9C0I3 900 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 HSD3B7Q9H2F3 369 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 DHX36Q9H2U1 1008 aaKnown RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 MTMR4Q9NYA4 1195 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 SERPINB13Q9UIV8 391 aa7.51□□□□□ -1.21
USP28-206ENST00000538224 TTF2Q9UNY4 1162 aaKnown RBP7.51□□□□□ -1.21
USP28-206ENST00000538224 SLX4Q8IY92 1834 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 IGKV6D-41A0A0C4DH26 115 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 ARHGAP6O43182 974 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 TTLL1O95922 423 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 OR52Z1P0C646 297 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 SNHG28P0DPA3 235 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 PDHBP11177 359 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 BMP6P22004 513 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 UBA7P41226 1012 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 AMPD3Q01432 767 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 EVX2Q03828 476 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 TRIM14Q14142 442 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 KCNB1Q14721 858 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 E2F4Q16254 413 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 ZNF827Q17R98 1081 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 TMEM266Q2M3C6 531 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 SLC4A8Q2Y0W8 1093 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 GPATCH4Q5T3I0 446 aaKnown RBP7.5□□□□□ -1.21
USP28-206ENST00000538224 ZNF658Q5TYW1 1059 aaPredicted RBP7.5□□□□□ -1.21
USP28-206ENST00000538224 CEP135Q66GS9 1140 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 CC2D2BQ6DHV5 1058 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 ISM2Q6H9L7 571 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 PDXDC2PQ6P474 469 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 NYAP1Q6ZVC0 841 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 NEK8Q86SG6 692 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 FOXP4Q8IVH2 680 aaPredicted RBP7.5□□□□□ -1.21
USP28-206ENST00000538224 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
USP28-206ENST00000538224 SLC44A5Q8NCS7 719 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 SUPT20HQ8NEM7 779 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 RASSF8Q8NHQ8 419 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 GPKOWQ92917 476 aaPredicted RBP eCLIP7.5□□□□□ -1.21
USP28-206ENST00000538224 EPSTI1Q96J88 318 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 ZMYND15Q9H091 742 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 RIOX1Q9H6W3 641 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 DISC1Q9NRI5 854 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 FANCLQ9NW38 375 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 RWDD2AQ9UIY3 292 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 PCDHA6Q9UN73 950 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 PCDHA8Q9Y5H6 950 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 ITIH6Q6UXX5 1313 aa7.5□□□□□ -1.21
USP28-206ENST00000538224 A0A087X0B3 334 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 A0A1B0GTH6 734 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 SMCO2A6NFE2 343 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 H0YIN7 160 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 RIOK3O14730 519 aaKnown RBP7.49□□□□□ -1.21
USP28-206ENST00000538224 RIMBP2O15034 1052 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 FOXN1O15353 648 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 SLC26A4O43511 780 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 CYTH3O43739 400 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 STX10O60499 249 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 APBA3O96018 575 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 MMP10P09238 476 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 ATP1A3P13637 1013 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 AFMP43652 599 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 ADCY7P51828 1080 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 PDE4CQ08493 712 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 PAK1Q13153 545 aa7.49□□□□□ -1.21
USP28-206ENST00000538224 CUL4BQ13620 913 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms