RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 TRIM6-TRIM34B2RNG4 842 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 ATP2A1O14983 1001 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 CNGA1P29973 690 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
LRRK1-211ENST00000538064 SLFN13Q68D06 897 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 SNRNP48Q6IEG0 339 aaKnown RBP17.69■□□□□ 0.42
LRRK1-211ENST00000538064 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 OSBPL3Q9H4L5 887 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
LRRK1-211ENST00000538064 DIS3Q9Y2L1 958 aaKnown RBP17.69■□□□□ 0.42
LRRK1-211ENST00000538064 CCDC171Q6TFL3 1326 aa17.69■□□□□ 0.42
LRRK1-211ENST00000538064 TSPY2A6NKD2 308 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 DNM1LO00429 736 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 SEPT4O43236 478 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 ORC4O43929 436 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 FGRP09769 529 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 BMP3P12645 472 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 ZNF792Q3KQV3 632 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
LRRK1-211ENST00000538064 PLEKHM2Q8IWE5 1019 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 KIFC2Q96AC6 838 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 SLC38A10Q9HBR0 1119 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
LRRK1-211ENST00000538064 ZBED4O75132 1171 aa17.67■□□□□ 0.42
LRRK1-211ENST00000538064 PGK2P07205 417 aa17.67■□□□□ 0.42
LRRK1-211ENST00000538064 OAZ1P54368 228 aa17.67■□□□□ 0.42
LRRK1-211ENST00000538064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.67■□□□□ 0.42
LRRK1-211ENST00000538064 RILPL2Q969X0 211 aa17.67■□□□□ 0.42
LRRK1-211ENST00000538064 TACC3Q9Y6A5 838 aa17.67■□□□□ 0.42
LRRK1-211ENST00000538064 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
LRRK1-211ENST00000538064 LTBP2Q14767 1821 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 FGAP02671 866 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
LRRK1-211ENST00000538064 NOVP48745 357 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 STAT2P52630 851 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 TINF2Q9BSI4 451 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 IL17RBQ9NRM6 502 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 ZMYND8Q9ULU4 1186 aaPredicted RBP17.66■□□□□ 0.42
LRRK1-211ENST00000538064 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 RIPK3Q9Y572 518 aa17.66■□□□□ 0.42
LRRK1-211ENST00000538064 CTDP1Q9Y5B0 961 aaPredicted RBP17.66■□□□□ 0.42
LRRK1-211ENST00000538064 LCTP09848 1927 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
LRRK1-211ENST00000538064 FDX1P10109 184 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 SLC1A4P43007 532 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 LRRC26Q2I0M4 334 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 FAM160B2Q86V87 743 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 CPXCR1Q8N123 301 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
LRRK1-211ENST00000538064 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 TMEM232C9JQI7 657 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 NMT2O60551 498 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 PLA2G6O60733 806 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 SDSP20132 328 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
LRRK1-211ENST00000538064 PRAMEF19Q5SWL8 479 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
LRRK1-211ENST00000538064 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
LRRK1-211ENST00000538064 FBXO40Q9UH90 709 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 ISY1Q9ULR0 285 aaKnown RBP17.64■□□□□ 0.41
LRRK1-211ENST00000538064 SYNGAP1Q96PV0 1343 aa17.64■□□□□ 0.41
LRRK1-211ENST00000538064 ANO1Q5XXA6 986 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 ARRDC4Q8NCT1 418 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 CHURC1Q8WUH1 139 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 STAG1Q8WVM7 1258 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 GDF15Q99988 308 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 SENP6Q9GZR1 1112 aaPredicted RBP17.63■□□□□ 0.41
LRRK1-211ENST00000538064 PCDH10Q9P2E7 1040 aa17.63■□□□□ 0.41
LRRK1-211ENST00000538064 KBTBD13C9JR72 458 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
LRRK1-211ENST00000538064 MCCP23508 829 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 BMP8BP34820 402 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 GJC2Q5T442 439 aaPredicted RBP17.62■□□□□ 0.41
LRRK1-211ENST00000538064 RASGRP2Q7LDG7 609 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 ZNF467Q7Z7K2 595 aaPredicted RBP17.62■□□□□ 0.41
LRRK1-211ENST00000538064 DCAF4Q8WV16 495 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 TOMM22Q9NS69 142 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
LRRK1-211ENST00000538064 HIP1O00291 1037 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 ZNF865P0CJ78 1059 aaPredicted RBP17.61■□□□□ 0.41
LRRK1-211ENST00000538064 RARBP10826 455 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 SYN1P17600 705 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 HAND2P61296 217 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
LRRK1-211ENST00000538064 RRP12Q5JTH9 1297 aaKnown RBP17.61■□□□□ 0.41
LRRK1-211ENST00000538064 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 MAMDC4Q6UXC1 1216 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 KCTD1Q719H9 257 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 TBC1D10CQ8IV04 446 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 CNPY2Q9Y2B0 182 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 ZNF536O15090 1300 aa17.61■□□□□ 0.41
LRRK1-211ENST00000538064 SZT2Q5T011 3432 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 DNAH12Q6ZR08 3092 aa17.6■□□□□ 0.41
LRRK1-211ENST00000538064 NEFLP07196 543 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms