RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 ZMYM1Q5SVZ6 1142 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
CHD4-207ENST00000537634 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 SEC62Q99442 399 aaKnown RBP11.53□□□□□ -0.56
CHD4-207ENST00000537634 XPNPEP3Q9NQH7 507 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
CHD4-207ENST00000537634 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 CNPY2Q9Y2B0 182 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
CHD4-207ENST00000537634 AKR1A1P14550 325 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 ADCYAP1R1P41586 468 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 PPARAQ07869 468 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 SLC39A5Q6ZMH5 540 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 CPXCR1Q8N123 301 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 MKL1Q969V6 931 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 FERMT2Q96AC1 680 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 PRDM5Q9NQX1 630 aaPredicted RBP11.52□□□□□ -0.57
CHD4-207ENST00000537634 FEM1BQ9UK73 627 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
CHD4-207ENST00000537634 ATP2A1O14983 1001 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
CHD4-207ENST00000537634 TFAP4Q01664 338 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 SNX17Q15036 470 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 TRIM60Q495X7 471 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 RNF180Q86T96 592 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 MSL3Q8N5Y2 521 aaKnown RBP11.51□□□□□ -0.57
CHD4-207ENST00000537634 DEFB123Q8N688 67 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 NEDD1Q8NHV4 660 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
CHD4-207ENST00000537634 PHF24Q9UPV7 400 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 RIPK3Q9Y572 518 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
CHD4-207ENST00000537634 PGK1P00558 417 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 ZNF865P0CJ78 1059 aaPredicted RBP11.5□□□□□ -0.57
CHD4-207ENST00000537634 BMP3P12645 472 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 STAT2P52630 851 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 OAZ1P54368 228 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
CHD4-207ENST00000537634 ANKRD45Q5TZF3 282 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 CCDC129Q6ZRS4 1044 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 CRBNQ96SW2 442 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 ZHX1Q9UKY1 873 aaPredicted RBP11.5□□□□□ -0.57
CHD4-207ENST00000537634 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
CHD4-207ENST00000537634 SZT2Q5T011 3432 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 DNAJC25-GNG10A0A024R161 153 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 TSPY2A6NKD2 308 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 FDX1P10109 184 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 SLC1A4P43007 532 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 C1orf53Q5VUE5 145 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 Q7L0L9 218 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
CHD4-207ENST00000537634 FAM160B2Q86V87 743 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 CHST13Q8NET6 341 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
CHD4-207ENST00000537634 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 PDLIM7Q9NR12 457 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 HOMER2Q9NSB8 354 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 FAM184BQ9ULE4 1060 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
CHD4-207ENST00000537634 MCM3APO60318 1980 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 A0A1W2PQ45 241 aaPredicted RBP11.48□□□□□ -0.57
CHD4-207ENST00000537634 A0A1W2PQY0 241 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 MAMDC4Q6UXC1 1216 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD4-207ENST00000537634 SLC17A8Q8NDX2 589 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 CHURC1Q8WUH1 139 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD4-207ENST00000537634 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
CHD4-207ENST00000537634 FOXP2O15409 715 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 RANBP6O60518 1105 aaKnown RBP11.47□□□□□ -0.57
CHD4-207ENST00000537634 ADAMTS4O75173 837 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 SNAI1O95863 264 aaPredicted RBP11.47□□□□□ -0.57
CHD4-207ENST00000537634 CLTBP09497 229 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 MCCP23508 829 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 PDE1AP54750 535 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 TLE2Q04725 743 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 HDAC1Q13547 482 aaPredicted RBP11.47□□□□□ -0.57
CHD4-207ENST00000537634 NUP133Q8WUM0 1156 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 BADQ92934 168 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 TSEN34Q9BSV6 310 aaKnown RBP11.47□□□□□ -0.57
CHD4-207ENST00000537634 ABHD16BQ9H3Z7 469 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 SPC25Q9HBM1 224 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 HELLSQ9NRZ9 838 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
CHD4-207ENST00000537634 TACC3Q9Y6A5 838 aa11.47□□□□□ -0.57
CHD4-207ENST00000537634 LAMA3Q16787 3333 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms