RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 APOBRQ0VD83 1088 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 LDLRAD1Q5T700 205 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 HS2ST1Q7LGA3 356 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 GFOD1Q9NXC2 390 aa9.3□□□□□ -0.92
CCDC7-208ENST00000537047 MBD1Q9UIS9 605 aaPredicted RBP9.3□□□□□ -0.92
CCDC7-208ENST00000537047 CNOT6Q9ULM6 557 aaKnown RBP9.3□□□□□ -0.92
CCDC7-208ENST00000537047 NME1P15531 152 aaKnown RBP9.29□□□□□ -0.92
CCDC7-208ENST00000537047 BUD31P41223 144 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-208ENST00000537047 CTSKP43235 329 aa9.29□□□□□ -0.92
CCDC7-208ENST00000537047 KIR2DL1P43626 348 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-208ENST00000537047 KIR2DL2P43627 348 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-208ENST00000537047 CEBPAP49715 358 aaPredicted RBP9.29□□□□□ -0.92
CCDC7-208ENST00000537047 EPHB3P54753 998 aa9.29□□□□□ -0.92
CCDC7-208ENST00000537047 SRSF3P84103 164 aaKnown RBP9.29□□□□□ -0.92
CCDC7-208ENST00000537047 SLC6A18Q96N87 628 aa9.29□□□□□ -0.92
CCDC7-208ENST00000537047 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
CCDC7-208ENST00000537047 KCTD3Q9Y597 815 aa9.29□□□□□ -0.92
CCDC7-208ENST00000537047 CTSWP56202 376 aa9.28□□□□□ -0.92
CCDC7-208ENST00000537047 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
CCDC7-208ENST00000537047 SLC9A7Q96T83 725 aa9.28□□□□□ -0.92
CCDC7-208ENST00000537047 MKRN2Q9H000 416 aaKnown RBP9.28□□□□□ -0.92
CCDC7-208ENST00000537047 ADAMTS20P59510 1910 aa9.27□□□□□ -0.93
CCDC7-208ENST00000537047 BMP7P18075 431 aa9.27□□□□□ -0.93
CCDC7-208ENST00000537047 VIPR1P32241 457 aa9.27□□□□□ -0.93
CCDC7-208ENST00000537047 RTP1P59025 263 aa9.27□□□□□ -0.93
CCDC7-208ENST00000537047 REXO1Q8N1G1 1221 aaKnown RBP9.27□□□□□ -0.93
CCDC7-208ENST00000537047 KRTAP9-3Q9BYQ3 159 aa9.27□□□□□ -0.93
CCDC7-208ENST00000537047 GPR55Q9Y2T6 319 aaPredicted RBP9.27□□□□□ -0.93
CCDC7-208ENST00000537047 PI3P19957 117 aa9.26□□□□□ -0.93
CCDC7-208ENST00000537047 RAD51AP2Q09MP3 1159 aa9.26□□□□□ -0.93
CCDC7-208ENST00000537047 NKD1Q969G9 470 aa9.26□□□□□ -0.93
CCDC7-208ENST00000537047 FADS2P1A8MWK0 482 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 ACRP10323 421 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 HSF5Q4G112 596 aaPredicted RBP9.25□□□□□ -0.93
CCDC7-208ENST00000537047 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 SLITRK4Q8IW52 837 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 CNTD2Q9H8S5 307 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 PARD6AQ9NPB6 346 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 CRTAC1Q9NQ79 661 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 ERVK13-1Q9NX77 482 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 FBXL21Q9UKT6 434 aa9.25□□□□□ -0.93
CCDC7-208ENST00000537047 MEIS3P2A8K0S8 358 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 C9IYK1 514 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 TNFRSF10CO14798 259 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 ITGAEP38570 1179 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 ZNF165P49910 485 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 FCRL2Q96LA5 508 aaPredicted RBP9.24□□□□□ -0.93
CCDC7-208ENST00000537047 CDADC1Q9BWV3 514 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 NT5C1AQ9BXI3 368 aa9.24□□□□□ -0.93
CCDC7-208ENST00000537047 PNLIPP16233 465 aa9.23□□□□□ -0.93
CCDC7-208ENST00000537047 CCNFP41002 786 aa9.23□□□□□ -0.93
CCDC7-208ENST00000537047 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
CCDC7-208ENST00000537047 ZNF326Q5BKZ1 582 aaKnown RBP9.23□□□□□ -0.93
CCDC7-208ENST00000537047 EPB41L4AQ9HCS5 686 aaPredicted RBP9.23□□□□□ -0.93
CCDC7-208ENST00000537047 AP5S1Q9NUS5 200 aa9.23□□□□□ -0.93
CCDC7-208ENST00000537047 SIRT5Q9NXA8 310 aa9.23□□□□□ -0.93
CCDC7-208ENST00000537047 PCDHB12Q9Y5F1 795 aa9.23□□□□□ -0.93
CCDC7-208ENST00000537047 SHOXO15266 292 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 TRIM13O60858 407 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 ZNF385BQ569K4 471 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 TMEM87AQ8NBN3 555 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 TMEM52Q8NDY8 209 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 KCNC2Q96PR1 638 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 SPON2Q9BUD6 331 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 KLHL14Q9P2G3 628 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 TNFRSF10DQ9UBN6 386 aa9.22□□□□□ -0.93
CCDC7-208ENST00000537047 ZNF205O95201 554 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 VAV1P15498 845 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 CDR1P51861 262 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 ERVFRD-1P60508 538 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 YBX1P67809 324 aaKnown RBP9.21□□□□□ -0.94
CCDC7-208ENST00000537047 VMACQ2NL98 169 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 TCERG1LQ5VWI1 586 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 TDRD10Q5VZ19 366 aaKnown RBP9.21□□□□□ -0.94
CCDC7-208ENST00000537047 SLCO6A1Q86UG4 719 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 KIAA0825Q8IV33 1275 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 ZCCHC4Q9H5U6 513 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 IRAK3Q9Y616 596 aa9.21□□□□□ -0.94
CCDC7-208ENST00000537047 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
CCDC7-208ENST00000537047 PRKCAP17252 672 aa9.2□□□□□ -0.94
CCDC7-208ENST00000537047 BMP8BP34820 402 aa9.2□□□□□ -0.94
CCDC7-208ENST00000537047 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
CCDC7-208ENST00000537047 RTP2Q5QGT7 225 aa9.2□□□□□ -0.94
CCDC7-208ENST00000537047 SIGLEC10Q96LC7 697 aa9.2□□□□□ -0.94
CCDC7-208ENST00000537047 TAF6LQ9Y6J9 622 aa9.2□□□□□ -0.94
CCDC7-208ENST00000537047 N4BP3O15049 544 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 GALNT18Q6P9A2 607 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 PPFIBP1Q86W92 1011 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 MARCH10Q8NA82 808 aaPredicted RBP9.19□□□□□ -0.94
CCDC7-208ENST00000537047 RELTQ969Z4 430 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 SUCOQ9UBS9 1254 aaKnown RBP9.19□□□□□ -0.94
CCDC7-208ENST00000537047 PCDHGB7Q9Y5F8 929 aa9.19□□□□□ -0.94
CCDC7-208ENST00000537047 NUDT19A8MXV4 375 aa9.18□□□□□ -0.94
CCDC7-208ENST00000537047 HRKO00198 91 aa9.18□□□□□ -0.94
CCDC7-208ENST00000537047 ZNF394Q53GI3 561 aa9.18□□□□□ -0.94
CCDC7-208ENST00000537047 TMEFF1Q8IYR6 380 aa9.18□□□□□ -0.94
CCDC7-208ENST00000537047 NUP43Q8NFH3 380 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms