RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CTDP1Q9Y5B0 961 aaPredicted RBP23.45■■□□□ 1.34
TNFRSF1B-204ENST00000536782 ZBED4O75132 1171 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 TTLL1O95922 423 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 PDE4BQ07343 736 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 SNX17Q15036 470 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 OTUD7AQ8TE49 926 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 FERMT2Q96AC1 680 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 DDX11Q96FC9 970 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 CNPY2Q9Y2B0 182 aa23.44■■□□□ 1.34
TNFRSF1B-204ENST00000536782 ATP2A1O14983 1001 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 SLC3A2P08195 630 aaKnown RBP23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 ZNF865P0CJ78 1059 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 TSPY3P0CV98 308 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 TSPY8P0CW00 308 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 TAL1P17542 331 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 TRIM60Q495X7 471 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 RNF180Q86T96 592 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 CPXCR1Q8N123 301 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 MSL3Q8N5Y2 521 aaKnown RBP23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 SLC17A8Q8NDX2 589 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 KIFC2Q96AC6 838 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 NAPBQ9H115 298 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 MTMR10Q9NXD2 777 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 FEM1BQ9UK73 627 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 RIPK3Q9Y572 518 aa23.43■■□□□ 1.34
TNFRSF1B-204ENST00000536782 MYH4Q9Y623 1939 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 AKR1A1P14550 325 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 MX1P20591 662 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 SLC4A3P48751 1232 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 ZMYM1Q5SVZ6 1142 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 C1orf53Q5VUE5 145 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 GMCL1P1Q8NEA9 526 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 NEDD1Q8NHV4 660 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 PRDM5Q9NQX1 630 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 PHF24Q9UPV7 400 aa23.42■■□□□ 1.34
TNFRSF1B-204ENST00000536782 PPARAQ07869 468 aa23.41■■□□□ 1.34
TNFRSF1B-204ENST00000536782 LRRC47Q8N1G4 583 aaKnown RBP23.41■■□□□ 1.34
TNFRSF1B-204ENST00000536782 SLC38A10Q9HBR0 1119 aa23.41■■□□□ 1.34
TNFRSF1B-204ENST00000536782 RAVER2Q9HCJ3 691 aaKnown RBP23.41■■□□□ 1.34
TNFRSF1B-204ENST00000536782 PLIN4Q96Q06 1357 aa23.4■■□□□ 1.34
TNFRSF1B-204ENST00000536782 SYNGAP1Q96PV0 1343 aa23.4■■□□□ 1.34
TNFRSF1B-204ENST00000536782 PGK1P00558 417 aa23.4■■□□□ 1.34
TNFRSF1B-204ENST00000536782 ZBTB47Q9UFB7 747 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF1B-204ENST00000536782 EYSQ5T1H1 3165 aa23.4■■□□□ 1.34
TNFRSF1B-204ENST00000536782 MCM3APO60318 1980 aa23.4■■□□□ 1.34
TNFRSF1B-204ENST00000536782 DNAJC25-GNG10A0A024R161 153 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 BMP3P12645 472 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 OAZ1P54368 228 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TFAP4Q01664 338 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SLFN13Q68D06 897 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 MAMDC4Q6UXC1 1216 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 PDLIM7Q9NR12 457 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 FBXO40Q9UH90 709 aa23.39■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SNAI1O95863 264 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 RRP1P56182 461 aaKnown RBP23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ZNF467Q7Z7K2 595 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ANKRD35Q8N283 1001 aa23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CHST13Q8NET6 341 aa23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 FAM184BQ9ULE4 1060 aa23.38■■□□□ 1.33
TNFRSF1B-204ENST00000536782 FDX1P10109 184 aa23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TLE2Q04725 743 aa23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 PPP4R3BQ5MIZ7 849 aa23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 BADQ92934 168 aa23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 LENG1Q96BZ8 264 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ZHX1Q9UKY1 873 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ISY1Q9ULR0 285 aaKnown RBP23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 STXBP5LQ9Y2K9 1186 aa23.37■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SALL3Q9BXA9 1300 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 A0A1W2PQ45 241 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 A0A1W2PQY0 241 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TRIM43BA6NCK2 446 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TMEM232C9JQI7 657 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 POTEB2H3BUK9 544 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 DLL1O00548 723 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ADAMTS4O75173 837 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ANKRD45Q5TZF3 282 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SH3RF1Q7Z6J0 888 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TRIM43Q96BQ3 446 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TSEN34Q9BSV6 310 aaKnown RBP23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TACC3Q9Y6A5 838 aa23.36■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CDH23Q9H251 3354 aa23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 PRUNE2Q8WUY3 3088 aa23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 STAT2P52630 851 aa23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 FAM109BQ6ICB4 259 aaPredicted RBP23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CCDC129Q6ZRS4 1044 aa23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CHURC1Q8WUH1 139 aa23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 GMCL1Q96IK5 515 aa23.35■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SYNRGQ9UMZ2 1314 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 TSPY2A6NKD2 308 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 FOXP2O15409 715 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CLTBP09497 229 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SLC1A4P43007 532 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CTDSPL2Q05D32 466 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 ACVR2BQ13705 512 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 SHHQ15465 462 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 FAM160B2Q86V87 743 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 EVI5LQ96CN4 794 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 HOMER2Q9NSB8 354 aa23.34■■□□□ 1.33
TNFRSF1B-204ENST00000536782 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms