RNA–Protein interactions for RNA: ENST00000536554.5

TOM1L1-203, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-203ENST00000536554 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 ZSCAN22P10073 491 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 SMARCA1P28370 1054 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 PRAMEF18Q5VWM3 479 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 CCDC82Q8N4S0 544 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 DCPSQ96C86 337 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 LZTS2Q9BRK4 669 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 SLC26A6Q9BXS9 759 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 RNF26Q9BY78 433 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 TAF1DQ9H5J8 278 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 GINM1Q9NU53 330 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 ZNF112Q9UJU3 913 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 SYNPO2Q9UMS6 1093 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 STK36Q9NRP7 1315 aa9.39□□□□□ -0.91
TOM1L1-203ENST00000536554 USP17L5A8MUK1 530 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 PARP1P09874 1014 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 PDHBP11177 359 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 ICA1Q05084 483 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 SUPT20HL1Q3ZLR7 823 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 DCAF15Q66K64 600 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 CLEC10AQ8IUN9 316 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 TRIM22Q8IYM9 498 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 FBXO18Q8NFZ0 1043 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 WASF1Q92558 559 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 ZBTB21Q9ULJ3 1066 aa9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 V9GY48 417 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-203ENST00000536554 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 KLRF2D3W0D1 207 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 H3BQV1 296 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 DEXIO95424 95 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 ASNSP08243 561 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 PKN1Q16512 942 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 IFFO2Q5TF58 517 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 USP17L2Q6R6M4 530 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 SULF1Q8IWU6 871 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 LRRC47Q8N1G4 583 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 GMCL1P1Q8NEA9 526 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 FOXD4L4Q8WXT5 416 aaPredicted RBP9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 KCNK17Q96T54 332 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 ZNF341Q9BYN7 854 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 TMX2Q9Y320 296 aa9.37□□□□□ -0.91
TOM1L1-203ENST00000536554 VPS37CA5D8V6 355 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 PPP1R3GB7ZBB8 358 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 F5H6K3 240 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 UBE2Q2LH0YL09 131 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 CYTH3O43739 400 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 F13A1P00488 732 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 GOLGA8HP0CJ92 632 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 PRSS12P56730 875 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 AKAP17AQ02040 695 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 KLRC3Q07444 240 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 PDE4DQ08499 809 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 ASPRV1Q53RT3 343 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 CDC37L1Q7L3B6 337 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 KLRG1Q96E93 195 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 C8orf76Q96K31 380 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 SPZ1Q9BXG8 430 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 MTMR7Q9Y216 660 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 GREB1LQ9C091 1923 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 CNTNAP5Q8WYK1 1306 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 USP2O75604 605 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 ZNF543Q08ER8 600 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 GPATCH4Q5T3I0 446 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 SLFN13Q68D06 897 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 OTUD7BQ6GQQ9 843 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 DLK2Q6UY11 383 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 KRT26Q7Z3Y9 468 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 USP48Q86UV5 1035 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 ACER1Q8TDN7 264 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 DCAF4Q8WV16 495 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 GMCL1Q96IK5 515 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 GBP4Q96PP9 640 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 ZSCAN16Q9H4T2 348 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 RIOX1Q9H6W3 641 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 GJB4Q9NTQ9 266 aa9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-203ENST00000536554 hCG_1642624A0A1W2PR95 340 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 ADM5C9JUS6 153 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 VEGFAP15692 232 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 INPP5BP32019 993 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 MCM4P33991 863 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 ECE1P42892 770 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 SLC1A4P43007 532 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 GUCY1B3Q02153 619 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 PFKFB3Q16875 520 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 EAPPQ56P03 285 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 KRT40Q6A162 431 aa9.35□□□□□ -0.91
TOM1L1-203ENST00000536554 RASGRP2Q7LDG7 609 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms