RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ZMYM6O95789 1325 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 MYH8P13535 1937 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 MINDY4BA8MYZ0 360 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 APPP05067 770 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 STAT3P40763 770 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 SHHQ15465 462 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 FAM109BQ6ICB4 259 aaPredicted RBP14.8□□□□□ -0.04
PRKDC-207ENST00000536483 RIOX2Q8IUF8 465 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 GUCD1Q96NT3 240 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 MKNK2Q9HBH9 465 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 PLIN4Q96Q06 1357 aa14.8□□□□□ -0.04
PRKDC-207ENST00000536483 VWA5AO00534 786 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 KCTD2Q14681 263 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 SNX17Q15036 470 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 ZNF792Q3KQV3 632 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 C9orf50Q5SZB4 431 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 FAM83BQ5T0W9 1011 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 SH3RF1Q7Z6J0 888 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 BADQ92934 168 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 GREB1LQ9C091 1923 aaPredicted RBP14.79□□□□□ -0.04
PRKDC-207ENST00000536483 NAPBQ9H115 298 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 CDH23Q9H251 3354 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 GOPCQ9HD26 462 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 XPNPEP3Q9NQH7 507 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 PDLIM7Q9NR12 457 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 PPP1R9AQ9ULJ8 1098 aa14.79□□□□□ -0.04
PRKDC-207ENST00000536483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRKDC-207ENST00000536483 A0A0D9SFI3 127 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 TRIM43BA6NCK2 446 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 PGK1P00558 417 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 SLC3A2P08195 630 aaKnown RBP14.78□□□□□ -0.04
PRKDC-207ENST00000536483 RARBP10826 455 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 TAL1P17542 331 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-207ENST00000536483 SDSP20132 328 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 NOVP48745 357 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 PDE4BQ07343 736 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 PPARAQ07869 468 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 STK11IPQ8N1F8 1099 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 REPS2Q8NFH8 660 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 TRIM43Q96BQ3 446 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-207ENST00000536483 FAM227BQ96M60 508 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 NRBP1Q9UHY1 535 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 ZNF214Q9UL59 606 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-207ENST00000536483 DIS3Q9Y2L1 958 aaKnown RBP14.78□□□□□ -0.04
PRKDC-207ENST00000536483 EYSQ5T1H1 3165 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 SMCHD1A6NHR9 2005 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 ZNFX1Q9P2E3 1918 aaKnown RBP14.78□□□□□ -0.04
PRKDC-207ENST00000536483 PARP14Q460N5 1801 aa14.78□□□□□ -0.04
PRKDC-207ENST00000536483 VCANP13611 3396 aa14.77□□□□□ -0.04
PRKDC-207ENST00000536483 HIP1O00291 1037 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 FGAP02671 866 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 PDE4AP27815 886 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 TLE2Q04725 743 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 ZNF697Q5TEC3 545 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 VPS53Q5VIR6 699 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 C1orf53Q5VUE5 145 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
PRKDC-207ENST00000536483 NUP88Q99567 741 aaPredicted RBP14.77□□□□□ -0.05
PRKDC-207ENST00000536483 MTMR4Q9NYA4 1195 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 PHF24Q9UPV7 400 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 LTBP2Q14767 1821 aa14.77□□□□□ -0.05
PRKDC-207ENST00000536483 COL11A1P12107 1806 aaPredicted RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
PRKDC-207ENST00000536483 ORC4O43929 436 aa14.76□□□□□ -0.05
PRKDC-207ENST00000536483 ZNF865P0CJ78 1059 aaPredicted RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 NT5C2P49902 561 aa14.76□□□□□ -0.05
PRKDC-207ENST00000536483 MFAP1P55081 439 aaKnown RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 PPP4R3BQ5MIZ7 849 aa14.76□□□□□ -0.05
PRKDC-207ENST00000536483 RNF180Q86T96 592 aa14.76□□□□□ -0.05
PRKDC-207ENST00000536483 ZNF589Q86UQ0 364 aaPredicted RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 LENG1Q96BZ8 264 aaPredicted RBP14.76□□□□□ -0.05
PRKDC-207ENST00000536483 CCDC171Q6TFL3 1326 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 F5H6K3 240 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 PCP11498 1178 aaKnown RBP14.75□□□□□ -0.05
PRKDC-207ENST00000536483 AKR1A1P14550 325 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 ITGB8P26012 769 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 COPB2P35606 906 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 KLRC3Q07444 240 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.75□□□□□ -0.05
PRKDC-207ENST00000536483 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 SLF1Q9BQI6 1058 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 CNPY2Q9Y2B0 182 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 RIPK3Q9Y572 518 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 TACC3Q9Y6A5 838 aa14.75□□□□□ -0.05
PRKDC-207ENST00000536483 PRDM1O75626 825 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 TTLL1O95922 423 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 NDUFB10O96000 172 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 SNRNP48Q6IEG0 339 aaKnown RBP14.74□□□□□ -0.05
PRKDC-207ENST00000536483 GMCL1P1Q8NEA9 526 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 DDX11Q96FC9 970 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 CEP95Q96GE4 821 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 TEX13BQ9BXU2 312 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 SEMA6BQ9H3T3 888 aa14.74□□□□□ -0.05
PRKDC-207ENST00000536483 A0A1W2PQ45 241 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms