RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 JMJD4Q9H9V9 463 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
CDCA3-206ENST00000536241 CNTNAP5Q8WYK1 1306 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 PLA2G6O60733 806 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 STAT2P52630 851 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 SNAP25P60880 206 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 TREML2Q5T2D2 321 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 SYDE2Q5VT97 1194 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
CDCA3-206ENST00000536241 CATSPERGQ6ZRH7 1159 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 HOMER1Q86YM7 354 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 AIFM3Q96NN9 605 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
CDCA3-206ENST00000536241 FLOT1O75955 427 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 DEXIO95424 95 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 GTF2A2P52657 109 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 FOSBP53539 338 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 MOGSQ13724 837 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 FASTKD5Q7L8L6 764 aaKnown RBP13.34□□□□□ -0.27
CDCA3-206ENST00000536241 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
CDCA3-206ENST00000536241 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-206ENST00000536241 RRP36Q96EU6 259 aaKnown RBP13.34□□□□□ -0.27
CDCA3-206ENST00000536241 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
CDCA3-206ENST00000536241 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 ZBTB48P10074 688 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-206ENST00000536241 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 COG2Q14746 738 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 GPAT2Q6NUI2 795 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 RASAL3Q86YV0 1011 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 STK36Q9NRP7 1315 aa13.33□□□□□ -0.28
CDCA3-206ENST00000536241 CCL15-CCL14A0A0B4J2E2 113 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 CETPP11597 493 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 SYT1P21579 422 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-206ENST00000536241 DSG3P32926 999 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 DDIT3P35638 169 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 APLP1P51693 650 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 CCL15Q16663 113 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-206ENST00000536241 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 WASF1Q92558 559 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 SLF1Q9BQI6 1058 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
CDCA3-206ENST00000536241 KIF3AQ9Y496 699 aa13.32□□□□□ -0.28
CDCA3-206ENST00000536241 FAM155AB1AL88 458 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-206ENST00000536241 ZBTB5O15062 677 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 SCG2P13521 617 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 GUCY1B3Q02153 619 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 CDC37Q16543 378 aaPredicted RBP13.31□□□□□ -0.28
CDCA3-206ENST00000536241 QRICH1Q2TAL8 776 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 BRI3BPQ8WY22 251 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
CDCA3-206ENST00000536241 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 HHIPL1Q96JK4 782 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 P2RX7Q99572 595 aaKnown RBP13.31□□□□□ -0.28
CDCA3-206ENST00000536241 HOXC10Q9NYD6 342 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
CDCA3-206ENST00000536241 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 AGTPBP1Q9UPW5 1226 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 PTPRFP10586 1907 aa13.31□□□□□ -0.28
CDCA3-206ENST00000536241 PPP1R11O60927 126 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-206ENST00000536241 SLC10A3P09131 477 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 PDCP20941 246 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 GRM1Q13255 1194 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 PKP1Q13835 747 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 DEFB115Q30KQ5 88 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 CYP4F22Q6NT55 531 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-206ENST00000536241 COA7Q96BR5 231 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 C8orf76Q96K31 380 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 PTPN18Q99952 460 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 VPS54Q9P1Q0 977 aa13.3□□□□□ -0.28
CDCA3-206ENST00000536241 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 VWA5AO00534 786 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 STX6O43752 255 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 KRT40Q6A162 431 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 WWC2Q6AWC2 1192 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 HEATR3Q7Z4Q2 680 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 FBXO18Q8NFZ0 1043 aa13.29□□□□□ -0.28
CDCA3-206ENST00000536241 ZIC5Q96T25 663 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms