RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PUS7LQ9H0K6 701 aaKnown RBP15.51■□□□□ 0.07
TNFRSF1A-207ENST00000535958 UNC80Q8N2C7 3258 aa15.51■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MROH7Q68CQ1 1323 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TMEM265A0A087WTH1 108 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MOXD2PA6NHM9 499 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SMIM22K7EJ46 135 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TAL1P17542 331 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 CCDC174Q6PII3 467 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 CPXCR1Q8N123 301 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ANKRD35Q8N283 1001 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 PRPF38AQ8NAV1 312 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MYLIPQ8WY64 445 aa15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 LENG1Q96BZ8 264 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 NUP88Q99567 741 aaPredicted RBP15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TSEN34Q9BSV6 310 aaKnown RBP15.5■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SYNRGQ9UMZ2 1314 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 F5H6K3 240 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 KIAA0355O15063 1070 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 CHGBP05060 677 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 APPP05067 770 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ZNF865P0CJ78 1059 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ACLYP53396 1101 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 KLRC3Q07444 240 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 LRRFIP1Q32MZ4 808 aaKnown RBP15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 GIMAP6Q6P9H5 292 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ZNF444Q8N0Y2 327 aaPredicted RBP15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MIER1Q8N108 512 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 REPS2Q8NFH8 660 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 GLT1D1Q96MS3 346 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ECHDC1Q9NTX5 307 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 NYAP2Q9P242 653 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 FBXO40Q9UH90 709 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SMCHD1A6NHR9 2005 aa15.49■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ADAMTS4O75173 837 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 NDUFB10O96000 172 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 C6orf222P0C671 652 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 GNAT2P19087 354 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 RASA1P20936 1047 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SBK1Q52WX2 424 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TOX2Q96NM4 488 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 CLIP2Q9UDT6 1046 aa15.48■□□□□ 0.07
TNFRSF1A-207ENST00000535958 GREB1LQ9C091 1923 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SMARCA5O60264 1052 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 DUSP11O75319 330 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 KCNA10Q16322 511 aa15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 APPBP2Q92624 585 aa15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TTYH1Q9H313 450 aaPredicted RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 RAVER2Q9HCJ3 691 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 FEM1BQ9UK73 627 aa15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 LAMA2P24043 3122 aaKnown RBP15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MYH4Q9Y623 1939 aa15.47■□□□□ 0.07
TNFRSF1A-207ENST00000535958 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ZFYP08048 801 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 SLC3A2P08195 630 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ITGB8P26012 769 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 FAAP100Q0VG06 881 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 PPIGQ13427 754 aaKnown RBP eCLIP15.46■□□□□ 0.077e-9■□□□□ 10.5
TNFRSF1A-207ENST00000535958 ACVR2BQ13705 512 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 DIEXFQ68CQ4 756 aaKnown RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 MAMDC4Q6UXC1 1216 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ANKRD33Q7Z3H0 272 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ZNF467Q7Z7K2 595 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 CHST13Q8NET6 341 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 NACAP1Q9BZK3 213 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ABHD16BQ9H3Z7 469 aa15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-207ENST00000535958 ELP1O95163 1332 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GSG1L2A8MUP6 293 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ATP2A1O14983 1001 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 RNF113AO15541 343 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 GPAA1O43292 621 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 PRDM1O75626 825 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TTLL1O95922 423 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TIMP1P01033 207 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TSPY3P0CV98 308 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 TSPY8P0CW00 308 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 DNAJB2P25686 324 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 PDE4BQ07343 736 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CCDC129Q6ZRS4 1044 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 RCAN3Q9UKA8 241 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 RIPK3Q9Y572 518 aa15.45■□□□□ 0.06
TNFRSF1A-207ENST00000535958 SNAI1O95863 264 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 ASGR1P07306 291 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 FDX1P10109 184 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 BMP3P12645 472 aa15.44■□□□□ 0.06
TNFRSF1A-207ENST00000535958 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms