RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PLCD4Q9BRC7 762 aa8.27□□□□□ -1.09
VBP1-203ENST00000535916 CHST7Q9NS84 486 aa8.27□□□□□ -1.09
VBP1-203ENST00000535916 CNOT6Q9ULM6 557 aaKnown RBP8.27□□□□□ -1.09
VBP1-203ENST00000535916 MEIS1O00470 390 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 SDHBP21912 280 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 CCNFP41002 786 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 ZNF165P49910 485 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 SLC6A18Q96N87 628 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 MKRN2Q9H000 416 aaKnown RBP8.26□□□□□ -1.09
VBP1-203ENST00000535916 CRTAC1Q9NQ79 661 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 GFOD1Q9NXC2 390 aa8.26□□□□□ -1.09
VBP1-203ENST00000535916 MEIS3P2A8K0S8 358 aa8.25□□□□□ -1.09
VBP1-203ENST00000535916 SSPNQ14714 243 aa8.25□□□□□ -1.09
VBP1-203ENST00000535916 NKD1Q969G9 470 aa8.25□□□□□ -1.09
VBP1-203ENST00000535916 NT5C1AQ9BXI3 368 aa8.25□□□□□ -1.09
VBP1-203ENST00000535916 RAPGEFL1Q9UHV5 662 aa8.25□□□□□ -1.09
VBP1-203ENST00000535916 MBD1Q9UIS9 605 aaPredicted RBP8.25□□□□□ -1.09
VBP1-203ENST00000535916 KCTD3Q9Y597 815 aa8.25□□□□□ -1.09
VBP1-203ENST00000535916 TNFRSF10CO14798 259 aa8.24□□□□□ -1.09
VBP1-203ENST00000535916 RTP1P59025 263 aa8.24□□□□□ -1.09
VBP1-203ENST00000535916 SRSF3P84103 164 aaKnown RBP8.24□□□□□ -1.09
VBP1-203ENST00000535916 KIR3DS1Q14943 382 aa8.24□□□□□ -1.09
VBP1-203ENST00000535916 LRRFIP1Q32MZ4 808 aaKnown RBP8.24□□□□□ -1.09
VBP1-203ENST00000535916 SLITRK4Q8IW52 837 aa8.24□□□□□ -1.09
VBP1-203ENST00000535916 EAF1Q96JC9 268 aaPredicted RBP8.24□□□□□ -1.09
VBP1-203ENST00000535916 FCRL2Q96LA5 508 aaPredicted RBP8.24□□□□□ -1.09
VBP1-203ENST00000535916 SLC9A7Q96T83 725 aa8.24□□□□□ -1.09
VBP1-203ENST00000535916 FBXL21Q9UKT6 434 aa8.24□□□□□ -1.09
VBP1-203ENST00000535916 GPR55Q9Y2T6 319 aaPredicted RBP8.24□□□□□ -1.09
VBP1-203ENST00000535916 FADS2P1A8MWK0 482 aa8.23□□□□□ -1.09
VBP1-203ENST00000535916 PNLIPP16233 465 aa8.23□□□□□ -1.09
VBP1-203ENST00000535916 CTSKP43235 329 aa8.23□□□□□ -1.09
VBP1-203ENST00000535916 TNFRSF10DQ9UBN6 386 aa8.23□□□□□ -1.09
VBP1-203ENST00000535916 PCDHB12Q9Y5F1 795 aa8.23□□□□□ -1.09
VBP1-203ENST00000535916 FAM86C2PA6NEL3 165 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 HRKO00198 91 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 VIPR1P32241 457 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 EPHB3P54753 998 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 HSF5Q4G112 596 aaPredicted RBP8.22□□□□□ -1.09
VBP1-203ENST00000535916 ZNF385BQ569K4 471 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 LDLRAD1Q5T700 205 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 SPON2Q9BUD6 331 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 ERVK13-1Q9NX77 482 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 TAF6LQ9Y6J9 622 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 NCANO14594 1321 aa8.22□□□□□ -1.09
VBP1-203ENST00000535916 ZNF205O95201 554 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 PI3P19957 117 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 HOXA5P20719 270 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 CEBPAP49715 358 aaPredicted RBP8.21□□□□□ -1.1
VBP1-203ENST00000535916 AUHQ13825 339 aaKnown RBP8.21□□□□□ -1.1
VBP1-203ENST00000535916 CRTC3Q6UUV7 619 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 PANK1Q8TE04 598 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 CDADC1Q9BWV3 514 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 CNTD2Q9H8S5 307 aa8.21□□□□□ -1.1
VBP1-203ENST00000535916 RFXAPO00287 272 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 PRRG2O14669 202 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 ACRP10323 421 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 BMP7P18075 431 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 BMP8BP34820 402 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 ERVFRD-1P60508 538 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 YBX1P67809 324 aaKnown RBP8.2□□□□□ -1.1
VBP1-203ENST00000535916 TCERG1LQ5VWI1 586 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 GALNT18Q6P9A2 607 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 TMEM87AQ8NBN3 555 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 SIGLEC10Q96LC7 697 aa8.2□□□□□ -1.1
VBP1-203ENST00000535916 C9IYK1 514 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 CTSWP56202 376 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 SLCO6A1Q86UG4 719 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 C20orf173Q96LM9 149 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 BCL11AQ9H165 835 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 PARD6AQ9NPB6 346 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 SUCOQ9UBS9 1254 aaKnown RBP8.19□□□□□ -1.1
VBP1-203ENST00000535916 IRAK3Q9Y616 596 aa8.19□□□□□ -1.1
VBP1-203ENST00000535916 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
VBP1-203ENST00000535916 B8ZZF3 427 aa8.18□□□□□ -1.1
VBP1-203ENST00000535916 SHOXO15266 292 aa8.18□□□□□ -1.1
VBP1-203ENST00000535916 VAV1P15498 845 aa8.18□□□□□ -1.1
VBP1-203ENST00000535916 ZCCHC4Q9H5U6 513 aa8.18□□□□□ -1.1
VBP1-203ENST00000535916 KLHL14Q9P2G3 628 aa8.18□□□□□ -1.1
VBP1-203ENST00000535916 ZNRF3Q9ULT6 936 aa8.18□□□□□ -1.1
VBP1-203ENST00000535916 N4BP3O15049 544 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 PRKCAP17252 672 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 ENDOUP21128 410 aaKnown RBP8.17□□□□□ -1.1
VBP1-203ENST00000535916 CDR1P51861 262 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 RTP2Q5QGT7 225 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 TDRD10Q5VZ19 366 aaKnown RBP8.17□□□□□ -1.1
VBP1-203ENST00000535916 C7orf61Q8IZ16 206 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 TMEM52Q8NDY8 209 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 PRR13Q9NZ81 148 aa8.17□□□□□ -1.1
VBP1-203ENST00000535916 TRIM13O60858 407 aa8.16□□□□□ -1.1
VBP1-203ENST00000535916 MPOP05164 745 aa8.16□□□□□ -1.1
VBP1-203ENST00000535916 ZNF16P17020 682 aaPredicted RBP8.16□□□□□ -1.1
VBP1-203ENST00000535916 INTS3Q68E01 1043 aaKnown RBP8.16□□□□□ -1.1
VBP1-203ENST00000535916 PPFIBP1Q86W92 1011 aa8.16□□□□□ -1.1
VBP1-203ENST00000535916 TMEM151BQ8IW70 566 aa8.16□□□□□ -1.1
VBP1-203ENST00000535916 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
VBP1-203ENST00000535916 NUP43Q8NFH3 380 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms