RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 C12orf60Q5U649 245 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 SNRNP48Q6IEG0 339 aaKnown RBP9.66□□□□□ -0.86
CHFR-211ENST00000535897 C16orf86Q6ZW13 317 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 ANKRD33Q7Z3H0 272 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 STK11IPQ8N1F8 1099 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 USP38Q8NB14 1042 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-211ENST00000535897 KIF1BPQ96EK5 621 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 TOX2Q96NM4 488 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 NUP88Q99567 741 aaPredicted RBP9.66□□□□□ -0.86
CHFR-211ENST00000535897 SLF1Q9BQI6 1058 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHFR-211ENST00000535897 TSEN34Q9BSV6 310 aaKnown RBP9.66□□□□□ -0.86
CHFR-211ENST00000535897 TEX13BQ9BXU2 312 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 SPC25Q9HBM1 224 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 ZNF214Q9UL59 606 aaPredicted RBP9.66□□□□□ -0.86
CHFR-211ENST00000535897 ADAMTS5Q9UNA0 930 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
CHFR-211ENST00000535897 MROH7Q68CQ1 1323 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 TNFRSF10AO00220 468 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 HMMRO75330 724 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 ADD2P35612 726 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 PPIGQ13427 754 aaKnown RBP eCLIP9.65□□□□□ -0.867e-9■■■□□ 17.6
CHFR-211ENST00000535897 MFSD5Q6N075 450 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 CPXCR1Q8N123 301 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 ANKRD35Q8N283 1001 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 PCSK9Q8NBP7 692 aaKnown RBP9.65□□□□□ -0.86
CHFR-211ENST00000535897 PANK1Q8TE04 598 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 PPP1R12CQ9BZL4 782 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 BOLA2Q9H3K6 86 aa9.65□□□□□ -0.86
CHFR-211ENST00000535897 ISY1Q9ULR0 285 aaKnown RBP9.65□□□□□ -0.86
CHFR-211ENST00000535897 CHD9Q3L8U1 2897 aa9.65□□□□□ -0.87
CHFR-211ENST00000535897 MYH7P12883 1935 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 SYNGAP1Q96PV0 1343 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 MYADML2A6NDP7 307 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 GRXCR1A8MXD5 290 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 TLR3O15455 904 aaKnown RBP9.64□□□□□ -0.87
CHFR-211ENST00000535897 ZBED4O75132 1171 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 ACRP10323 421 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 CSF2RAP15509 400 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 PBX2P40425 430 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHFR-211ENST00000535897 ACVR2BQ13705 512 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 TMEM199Q8N511 208 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
CHFR-211ENST00000535897 IL27Q8NEV9 243 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 PRDM12Q9H4Q4 367 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 MKNK2Q9HBH9 465 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 TBX21Q9UL17 535 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
CHFR-211ENST00000535897 ELP1O95163 1332 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 A0A0U1RQG5 324 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 F5H6K3 240 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 DUSP11O75319 330 aaKnown RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 SNAI1O95863 264 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 CHGBP05060 677 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 ASGR1P07306 291 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 COL9A1P20849 921 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 IGFBP4P22692 258 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 IRX5P78411 483 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 KLRC3Q07444 240 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 CCDC85BQ15834 202 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 CCDC144BQ3MJ40 725 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 GNASQ5JWF2 1037 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 ZSCAN25Q6NSZ9 544 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 CTR9Q6PD62 1173 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 PSRC1Q6PGN9 363 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 PRPF38AQ8NAV1 312 aaKnown RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 KLHDC9Q8NEP7 349 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 REPS2Q8NFH8 660 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 PBX4Q9BYU1 374 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 ABHD16BQ9H3Z7 469 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 RAVER2Q9HCJ3 691 aaKnown RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 THEGQ9P2T0 379 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 ARPP21Q9UBL0 812 aaPredicted RBP9.63□□□□□ -0.87
CHFR-211ENST00000535897 MSRAQ9UJ68 235 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 RIPK3Q9Y572 518 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 MCM3APO60318 1980 aa9.63□□□□□ -0.87
CHFR-211ENST00000535897 ZBED9Q6R2W3 1325 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 MINDY4BA8MYZ0 360 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 ARVCFO00192 962 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 RAB11FIP3O75154 756 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 NDUFB10O96000 172 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 ATP5JP18859 108 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 CST5P28325 142 aaPredicted RBP9.62□□□□□ -0.87
CHFR-211ENST00000535897 UBE3CQ15386 1083 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 TMEM240Q5SV17 173 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 MAMDC4Q6UXC1 1216 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 ZNF365Q70YC5 407 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 C16orf59Q7L2K0 433 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
CHFR-211ENST00000535897 RPAP2Q8IXW5 612 aaPredicted RBP9.62□□□□□ -0.87
CHFR-211ENST00000535897 ATXN2LQ8WWM7 1075 aaKnown RBP9.62□□□□□ -0.87
CHFR-211ENST00000535897 HAUS7Q99871 368 aa9.62□□□□□ -0.87
CHFR-211ENST00000535897 MTIF3Q9H2K0 278 aaKnown RBP9.62□□□□□ -0.87
CHFR-211ENST00000535897 SLC28A3Q9HAS3 691 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms