RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SLC17A8Q8NDX2 589 aa24.56■■□□□ 1.52
LTBR-205ENST00000535739 ZNF287Q9HBT7 754 aa24.56■■□□□ 1.52
LTBR-205ENST00000535739 XPNPEP3Q9NQH7 507 aa24.56■■□□□ 1.52
LTBR-205ENST00000535739 MTMR4Q9NYA4 1195 aa24.56■■□□□ 1.52
LTBR-205ENST00000535739 ERC2O15083 957 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 PGK1P00558 417 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 ZNF865P0CJ78 1059 aaPredicted RBP24.55■■□□□ 1.52
LTBR-205ENST00000535739 CPXCR1Q8N123 301 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 MKL1Q969V6 931 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 KIFC2Q96AC6 838 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 FSD1Q9BTV5 496 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 PRDM5Q9NQX1 630 aaPredicted RBP24.55■■□□□ 1.52
LTBR-205ENST00000535739 MTMR10Q9NXD2 777 aa24.55■■□□□ 1.52
LTBR-205ENST00000535739 LRRC47Q8N1G4 583 aaKnown RBP24.54■■□□□ 1.52
LTBR-205ENST00000535739 LENG1Q96BZ8 264 aaPredicted RBP24.54■■□□□ 1.52
LTBR-205ENST00000535739 ZBED4O75132 1171 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 TTLL1O95922 423 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 ZMYM1Q5SVZ6 1142 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 DDX11Q96FC9 970 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 NACAP1Q9BZK3 213 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 RAVER2Q9HCJ3 691 aaKnown RBP24.53■■□□□ 1.52
LTBR-205ENST00000535739 PHF24Q9UPV7 400 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 CNPY2Q9Y2B0 182 aa24.53■■□□□ 1.52
LTBR-205ENST00000535739 CTDP1Q9Y5B0 961 aaPredicted RBP24.53■■□□□ 1.52
LTBR-205ENST00000535739 ATP2A1O14983 1001 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 AKR1A1P14550 325 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 SH3RF1Q7Z6J0 888 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 RNF180Q86T96 592 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 NEDD1Q8NHV4 660 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 NAPBQ9H115 298 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 SLC38A10Q9HBR0 1119 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 PDLIM7Q9NR12 457 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 FEM1BQ9UK73 627 aa24.52■■□□□ 1.52
LTBR-205ENST00000535739 DNAJC25-GNG10A0A024R161 153 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 SNAI1O95863 264 aaPredicted RBP24.51■■□□□ 1.51
LTBR-205ENST00000535739 TSPY3P0CV98 308 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 TSPY8P0CW00 308 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 MX1P20591 662 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 PDE4BQ07343 736 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 PPARAQ07869 468 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 C1orf53Q5VUE5 145 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 GMCL1P1Q8NEA9 526 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 BADQ92934 168 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 PLIN4Q96Q06 1357 aa24.51■■□□□ 1.51
LTBR-205ENST00000535739 TRIM43BA6NCK2 446 aa24.5■■□□□ 1.51
LTBR-205ENST00000535739 TFAP4Q01664 338 aa24.5■■□□□ 1.51
LTBR-205ENST00000535739 TLE2Q04725 743 aa24.5■■□□□ 1.51
LTBR-205ENST00000535739 SLFN13Q68D06 897 aa24.5■■□□□ 1.51
LTBR-205ENST00000535739 MSL3Q8N5Y2 521 aaKnown RBP24.5■■□□□ 1.51
LTBR-205ENST00000535739 TRIM43Q96BQ3 446 aaPredicted RBP24.5■■□□□ 1.51
LTBR-205ENST00000535739 SYNPO2Q9UMS6 1093 aa24.5■■□□□ 1.51
LTBR-205ENST00000535739 SLC3A2P08195 630 aaKnown RBP24.49■■□□□ 1.51
LTBR-205ENST00000535739 BMP3P12645 472 aa24.49■■□□□ 1.51
LTBR-205ENST00000535739 SHHQ15465 462 aa24.49■■□□□ 1.51
LTBR-205ENST00000535739 MAMDC4Q6UXC1 1216 aa24.49■■□□□ 1.51
LTBR-205ENST00000535739 CCDC129Q6ZRS4 1044 aa24.49■■□□□ 1.51
LTBR-205ENST00000535739 STXBP5LQ9Y2K9 1186 aa24.49■■□□□ 1.51
LTBR-205ENST00000535739 SYNGAP1Q96PV0 1343 aa24.49■■□□□ 1.51
LTBR-205ENST00000535739 A0A1W2PQ45 241 aaPredicted RBP24.48■■□□□ 1.51
LTBR-205ENST00000535739 A0A1W2PQY0 241 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 POTEB2H3BUK9 544 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 ADAMTS4O75173 837 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 C9orf50Q5SZB4 431 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 ANKRD35Q8N283 1001 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 CHMP4CQ96CF2 233 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 SALL3Q9BXA9 1300 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 ZHX1Q9UKY1 873 aaPredicted RBP24.48■■□□□ 1.51
LTBR-205ENST00000535739 FAM184BQ9ULE4 1060 aa24.48■■□□□ 1.51
LTBR-205ENST00000535739 ISY1Q9ULR0 285 aaKnown RBP24.48■■□□□ 1.51
LTBR-205ENST00000535739 UNC80Q8N2C7 3258 aa24.47■■□□□ 1.51
LTBR-205ENST00000535739 SYNRGQ9UMZ2 1314 aa24.47■■□□□ 1.51
LTBR-205ENST00000535739 TMEM232C9JQI7 657 aa24.47■■□□□ 1.51
LTBR-205ENST00000535739 FOXP2O15409 715 aa24.47■■□□□ 1.51
LTBR-205ENST00000535739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.47■■□□□ 1.51
LTBR-205ENST00000535739 INCENPQ9NQS7 918 aa24.47■■□□□ 1.51
LTBR-205ENST00000535739 OAZ1P54368 228 aa24.46■■□□□ 1.51
LTBR-205ENST00000535739 RRP1P56182 461 aaKnown RBP24.46■■□□□ 1.51
LTBR-205ENST00000535739 CTDSPL2Q05D32 466 aa24.46■■□□□ 1.51
LTBR-205ENST00000535739 ZNF467Q7Z7K2 595 aaPredicted RBP24.46■■□□□ 1.51
LTBR-205ENST00000535739 CHST13Q8NET6 341 aa24.46■■□□□ 1.51
LTBR-205ENST00000535739 FGD4Q96M96 766 aa24.46■■□□□ 1.51
LTBR-205ENST00000535739 HOMER2Q9NSB8 354 aa24.46■■□□□ 1.51
LTBR-205ENST00000535739 FBXO40Q9UH90 709 aa24.46■■□□□ 1.51
LTBR-205ENST00000535739 PQBP1O60828 265 aaKnown RBP24.45■■□□□ 1.5
LTBR-205ENST00000535739 CLTBP09497 229 aa24.45■■□□□ 1.5
LTBR-205ENST00000535739 ITGB8P26012 769 aa24.45■■□□□ 1.5
LTBR-205ENST00000535739 ANKRD45Q5TZF3 282 aa24.45■■□□□ 1.5
LTBR-205ENST00000535739 FAM109BQ6ICB4 259 aaPredicted RBP24.45■■□□□ 1.5
LTBR-205ENST00000535739 FAM161BQ96MY7 647 aa24.45■■□□□ 1.5
LTBR-205ENST00000535739 TSEN34Q9BSV6 310 aaKnown RBP24.45■■□□□ 1.5
LTBR-205ENST00000535739 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.45■■□□□ 1.5
LTBR-205ENST00000535739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.45■■□□□ 1.5
LTBR-205ENST00000535739 TACC3Q9Y6A5 838 aa24.45■■□□□ 1.5
LTBR-205ENST00000535739 MCCP23508 829 aa24.44■■□□□ 1.5
LTBR-205ENST00000535739 STAT2P52630 851 aa24.44■■□□□ 1.5
LTBR-205ENST00000535739 ACLYP53396 1101 aa24.44■■□□□ 1.5
LTBR-205ENST00000535739 ACVR2BQ13705 512 aa24.44■■□□□ 1.5
LTBR-205ENST00000535739 KLHDC9Q8NEP7 349 aa24.44■■□□□ 1.5
LTBR-205ENST00000535739 CRBNQ96SW2 442 aa24.44■■□□□ 1.5
LTBR-205ENST00000535739 EYSQ5T1H1 3165 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms