RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MB21D1Q8N884 522 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 REPS2Q8NFH8 660 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 GPRC5AQ8NFJ5 357 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 CD99L2Q8TCZ2 262 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 BACH2Q9BYV9 841 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 UPF3BQ9BZI7 483 aaKnown RBP14.1□□□□□ -0.15
CHD4-203ENST00000535717 ARHGAP39Q9C0H5 1083 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 PRDM10Q9NQV6 1147 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 CYP46A1Q9Y6A2 500 aa14.1□□□□□ -0.15
CHD4-203ENST00000535717 ECM2O94769 699 aaPredicted RBP14.09□□□□□ -0.15
CHD4-203ENST00000535717 PARP1P09874 1014 aaKnown RBP14.09□□□□□ -0.15
CHD4-203ENST00000535717 GRM4Q14833 912 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 TMEM132BQ14DG7 1078 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 ASPRV1Q53RT3 343 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 SYDE2Q5VT97 1194 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 STAG2Q8N3U4 1231 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 ERO1AQ96HE7 468 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 MYL10Q9BUA6 226 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 C22orf23Q9BZE7 217 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 CPVLQ9H3G5 476 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 SLC38A10Q9HBR0 1119 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 MAD2L2Q9UI95 211 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 BRPF3Q9ULD4 1205 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 PRR12Q9ULL5 1215 aa14.09□□□□□ -0.15
CHD4-203ENST00000535717 ZSWIM8A7E2V4 1837 aa14.08□□□□□ -0.15
CHD4-203ENST00000535717 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.15
CHD4-203ENST00000535717 PALM3A6NDB9 673 aaPredicted RBP14.08□□□□□ -0.16
CHD4-203ENST00000535717 ZBED4O75132 1171 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 DDAH1O94760 285 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 SNAP25P60880 206 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 FGD1P98174 961 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 FBXL16Q8N461 479 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 NUP133Q8WUM0 1156 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 BRF1Q92994 677 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 AGXT2Q9BYV1 514 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 UBA5Q9GZZ9 404 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 PORCNQ9H237 461 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 ZNF214Q9UL59 606 aaPredicted RBP14.08□□□□□ -0.16
CHD4-203ENST00000535717 SLC12A7Q9Y666 1083 aa14.08□□□□□ -0.16
CHD4-203ENST00000535717 KLF18A0A0U1RQI7 1052 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 KLRF2D3W0D1 207 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 RXRAP19793 462 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 PSMC4P43686 418 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 RBM25P49756 843 aaKnown RBP14.07□□□□□ -0.16
CHD4-203ENST00000535717 APOBRQ0VD83 1088 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
CHD4-203ENST00000535717 PLS1Q14651 629 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 KIF22Q14807 665 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 APOA5Q6Q788 366 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 RAB11FIP4Q86YS3 637 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 MAP3K14Q99558 947 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 KIF2CQ99661 725 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 MOV10L1Q9BXT6 1211 aaKnown RBP14.07□□□□□ -0.16
CHD4-203ENST00000535717 PDRG1Q9NUG6 133 aa14.07□□□□□ -0.16
CHD4-203ENST00000535717 ATP2A1O14983 1001 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 FMNL1O95466 1100 aaPredicted RBP14.06□□□□□ -0.16
CHD4-203ENST00000535717 CALM1P0DP23 149 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 CALM2P0DP24 149 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 CALM3P0DP25 149 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 FDX1P10109 184 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 STAT3P40763 770 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 FCGRTP55899 365 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 CCNA1P78396 465 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 SLC35G1Q2M3R5 365 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 SYNE3Q6ZMZ3 975 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 ADGRF4Q8IZF3 695 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 CPXCR1Q8N123 301 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 RANBP17Q9H2T7 1088 aaKnown RBP14.06□□□□□ -0.16
CHD4-203ENST00000535717 EFCC1Q9HA90 598 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 UPF2Q9HAU5 1272 aaKnown RBP14.06□□□□□ -0.16
CHD4-203ENST00000535717 RAVER2Q9HCJ3 691 aaKnown RBP14.06□□□□□ -0.16
CHD4-203ENST00000535717 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
CHD4-203ENST00000535717 ZNF536O15090 1300 aa14.06□□□□□ -0.16
CHD4-203ENST00000535717 ZBTB43O43298 467 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 MAPK4P31152 587 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 KIF5BP33176 963 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 OAZ1P54368 228 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 SNRNP48Q6IEG0 339 aaKnown RBP14.05□□□□□ -0.16
CHD4-203ENST00000535717 CCDC174Q6PII3 467 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 OTOP1Q7RTM1 612 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 NBPF11Q86T75 865 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 FANCBQ8NB91 859 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 CTCFLQ8NI51 663 aaPredicted RBP14.05□□□□□ -0.16
CHD4-203ENST00000535717 TEX13BQ9BXU2 312 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 ALDH8A1Q9H2A2 487 aaPredicted RBP14.05□□□□□ -0.16
CHD4-203ENST00000535717 JMJD4Q9H9V9 463 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 VAT1LQ9HCJ6 419 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 RIPK3Q9Y572 518 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 MGAMO43451 1857 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 HTTP42858 3142 aa14.05□□□□□ -0.16
CHD4-203ENST00000535717 GOLGA8BA8MQT2 603 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 TNPO2O14787 897 aaKnown RBP14.04□□□□□ -0.16
CHD4-203ENST00000535717 ERCC3P19447 782 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 NEK4P51957 841 aa14.04□□□□□ -0.16
CHD4-203ENST00000535717 EVCP57679 992 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 924.9 ms