RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 DIAPH3Q9NSV4 1193 aa6.01□□□□□ -1.45
USH1C-210ENST00000534556 HOXC10Q9NYD6 342 aa6.01□□□□□ -1.45
USH1C-210ENST00000534556 DNAJC25-GNG10A0A024R161 153 aa6□□□□□ -1.45
USH1C-210ENST00000534556 SLC15A5A6NIM6 579 aa6□□□□□ -1.45
USH1C-210ENST00000534556 TSPY2A6NKD2 308 aa6□□□□□ -1.45
USH1C-210ENST00000534556 TMEM232C9JQI7 657 aa6□□□□□ -1.45
USH1C-210ENST00000534556 SGPL1O95470 568 aa6□□□□□ -1.45
USH1C-210ENST00000534556 HMGCRP04035 888 aa6□□□□□ -1.45
USH1C-210ENST00000534556 PGK2P07205 417 aa6□□□□□ -1.45
USH1C-210ENST00000534556 CYP21A2P08686 494 aa6□□□□□ -1.45
USH1C-210ENST00000534556 XRCC5P13010 732 aaKnown RBP6□□□□□ -1.45
USH1C-210ENST00000534556 PRKAR2AP13861 404 aaKnown RBP6□□□□□ -1.45
USH1C-210ENST00000534556 PTGS1P23219 599 aa6□□□□□ -1.45
USH1C-210ENST00000534556 ADORA2AP29274 412 aa6□□□□□ -1.45
USH1C-210ENST00000534556 SLC16A2P36021 539 aa6□□□□□ -1.45
USH1C-210ENST00000534556 IRX5P78411 483 aaPredicted RBP6□□□□□ -1.45
USH1C-210ENST00000534556 PLS1Q14651 629 aa6□□□□□ -1.45
USH1C-210ENST00000534556 SEC23AQ15436 765 aa6□□□□□ -1.45
USH1C-210ENST00000534556 ZNF792Q3KQV3 632 aa6□□□□□ -1.45
USH1C-210ENST00000534556 WDR78Q5VTH9 848 aa6□□□□□ -1.45
USH1C-210ENST00000534556 RIOX2Q8IUF8 465 aa6□□□□□ -1.45
USH1C-210ENST00000534556 GMCL1P1Q8NEA9 526 aa6□□□□□ -1.45
USH1C-210ENST00000534556 SHCBP1Q8NEM2 672 aa6□□□□□ -1.45
USH1C-210ENST00000534556 KIFC2Q96AC6 838 aa6□□□□□ -1.45
USH1C-210ENST00000534556 GMCL1Q96IK5 515 aa6□□□□□ -1.45
USH1C-210ENST00000534556 AGBL1Q96MI9 1066 aa6□□□□□ -1.45
USH1C-210ENST00000534556 PURBQ96QR8 312 aaKnown RBP6□□□□□ -1.45
USH1C-210ENST00000534556 NUDT12Q9BQG2 462 aa6□□□□□ -1.45
USH1C-210ENST00000534556 SLF1Q9BQI6 1058 aa6□□□□□ -1.45
USH1C-210ENST00000534556 LSG1Q9H089 658 aaKnown RBP6□□□□□ -1.45
USH1C-210ENST00000534556 XRN2Q9H0D6 950 aaKnown RBP eCLIP6□□□□□ -1.45
USH1C-210ENST00000534556 SLC38A10Q9HBR0 1119 aa6□□□□□ -1.45
USH1C-210ENST00000534556 RAVER2Q9HCJ3 691 aaKnown RBP6□□□□□ -1.45
USH1C-210ENST00000534556 GOPCQ9HD26 462 aa6□□□□□ -1.45
USH1C-210ENST00000534556 GPHNQ9NQX3 736 aaPredicted RBP6□□□□□ -1.45
USH1C-210ENST00000534556 TCP11L1Q9NUJ3 509 aa6□□□□□ -1.45
USH1C-210ENST00000534556 ZSWIM5Q9P217 1185 aa6□□□□□ -1.45
USH1C-210ENST00000534556 CHD7Q9P2D1 2997 aa6□□□□□ -1.45
USH1C-210ENST00000534556 BIN2Q9UBW5 565 aaPredicted RBP6□□□□□ -1.45
USH1C-210ENST00000534556 STX8Q9UNK0 236 aa6□□□□□ -1.45
USH1C-210ENST00000534556 MTMR7Q9Y216 660 aa6□□□□□ -1.45
USH1C-210ENST00000534556 PRUNE2Q8WUY3 3088 aa6□□□□□ -1.45
USH1C-210ENST00000534556 TRANK1O15050 2925 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 GBF1Q92538 1859 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 RBAK-RBAKDNI3L0D1 243 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 ADCY6O43306 1168 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 KDM4AO75164 1064 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 SNHG28P0DPA3 235 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 PDHBP11177 359 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 BMP3P12645 472 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 CYBAP13498 195 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 STAT3P40763 770 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 ANTXR2P58335 489 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 CNTN2Q02246 1040 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 MUM1L1Q5H9M0 696 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 TMEM63BQ5T3F8 832 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 ANO1Q5XXA6 986 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 SNRNP48Q6IEG0 339 aaKnown RBP5.99□□□□□ -1.45
USH1C-210ENST00000534556 MFSD6Q6ZSS7 791 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 NCAPG2Q86XI2 1143 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 CPXCR1Q8N123 301 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 ENAHQ8N8S7 591 aaPredicted RBP5.99□□□□□ -1.45
USH1C-210ENST00000534556 PRPF38AQ8NAV1 312 aaKnown RBP5.99□□□□□ -1.45
USH1C-210ENST00000534556 GTF3C2Q8WUA4 911 aaPredicted RBP5.99□□□□□ -1.45
USH1C-210ENST00000534556 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 MAML3Q96JK9 1138 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 APBA2Q99767 749 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 ESYT1Q9BSJ8 1104 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 TMEM106CQ9BVX2 250 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 SH2D4AQ9H788 454 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 PRR12Q9ULL5 1215 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 SCN5AQ14524 2016 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 PFASO15067 1338 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 FRMPD2Q68DX3 1309 aaPredicted RBP5.99□□□□□ -1.45
USH1C-210ENST00000534556 RPTORQ8N122 1335 aa5.99□□□□□ -1.45
USH1C-210ENST00000534556 LOXHD1Q8IVV2 1947 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 SOWAHBA6NEL2 793 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 E7EWF7 191 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 HIP1O00291 1037 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 ZNF213O14771 459 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 ATP2A1O14983 1001 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 PLA2G6O60733 806 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 SNAI1O95863 264 aaPredicted RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 GOLGA8HP0CJ92 632 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 TOP1P11387 765 aaKnown RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 ZKSCAN1P17029 563 aaPredicted RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 RGS2P41220 211 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 SLC4A3P48751 1232 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 UBXN2AP68543 259 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 CCNA1P78396 465 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 BTNL9Q6UXG8 535 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.98□□□□□ -1.45
USH1C-210ENST00000534556 CENPQQ7L2Z9 268 aaPredicted RBP5.98□□□□□ -1.45
USH1C-210ENST00000534556 CHST3Q7LGC8 479 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 STAG2Q8N3U4 1231 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 MB21D1Q8N884 522 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 TBC1D5Q92609 795 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 ANKS1AQ92625 1134 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 MAP4K1Q92918 833 aa5.98□□□□□ -1.45
USH1C-210ENST00000534556 LENG1Q96BZ8 264 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms