RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 FAM83BQ5T0W9 1011 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 ZKSCAN2Q63HK3 967 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 TMED8Q6PL24 325 aaPredicted RBP11.16□□□□□ -0.62
PACS1-214ENST00000533811 ZNF365Q70YC5 407 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 SIAH1Q8IUQ4 282 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 AMOTL1Q8IY63 956 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 FTSJ3Q8IY81 847 aaKnown RBP11.16□□□□□ -0.62
PACS1-214ENST00000533811 TMEM199Q8N511 208 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 FAM122AQ96E09 287 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 GLT1D1Q96MS3 346 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 NKX2-4Q9H2Z4 354 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 IL1RAPL2Q9NP60 686 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 MSRAQ9UJ68 235 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
PACS1-214ENST00000533811 DIS3Q9Y2L1 958 aaKnown RBP11.16□□□□□ -0.62
PACS1-214ENST00000533811 SMIM22K7EJ46 135 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 VWA5AO00534 786 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 PRKAB2O43741 272 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 MBD4O95243 580 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 COPB2P35606 906 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 CDK8P49336 464 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 ADGRE1Q14246 886 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 SNRNP48Q6IEG0 339 aaKnown RBP11.15□□□□□ -0.62
PACS1-214ENST00000533811 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
PACS1-214ENST00000533811 C16orf59Q7L2K0 433 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 KLHDC9Q8NEP7 349 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 CCDC17Q96LX7 622 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 SPC25Q9HBM1 224 aa11.15□□□□□ -0.62
PACS1-214ENST00000533811 CTDP1Q9Y5B0 961 aaPredicted RBP11.15□□□□□ -0.62
PACS1-214ENST00000533811 MYH7P12883 1935 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 A0A0U1RQG5 324 aaPredicted RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 TLR3O15455 904 aaKnown RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 ASGR1P07306 291 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 CYP2C18P33260 490 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 PLA2G5P39877 138 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 RAB30Q15771 203 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 SLFNL1Q499Z3 407 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 ERC1Q8IUD2 1116 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 PCSK9Q8NBP7 692 aaKnown RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 NECAB3Q96P71 396 aaPredicted RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 MTIF3Q9H2K0 278 aaKnown RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 ZNF214Q9UL59 606 aaPredicted RBP11.14□□□□□ -0.63
PACS1-214ENST00000533811 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 MUC3AQ02505 3323 aa11.14□□□□□ -0.63
PACS1-214ENST00000533811 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 ELP1O95163 1332 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 SYNGAP1Q96PV0 1343 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 TCRBV5S4A2TA0A5A2 114 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 ARVCFO00192 962 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 ACVR2BQ13705 512 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 SKIV2LQ15477 1246 aaKnown RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 CCSAPQ6IQ19 270 aaPredicted RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 NOL8Q76FK4 1167 aaKnown RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 CPXCR1Q8N123 301 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 MSL3Q8N5Y2 521 aaKnown RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 REPS2Q8NFH8 660 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 TEX13BQ9BXU2 312 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 SLC28A3Q9HAS3 691 aa11.13□□□□□ -0.63
PACS1-214ENST00000533811 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 CXXC1Q9P0U4 656 aaPredicted RBP11.13□□□□□ -0.63
PACS1-214ENST00000533811 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 USP17L21D6R901 530 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 ADCY6O43306 1168 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 CDK7P50613 346 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 CCDC144BQ3MJ40 725 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 GNASQ5JWF2 1037 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 C12orf60Q5U649 245 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 RASIP1Q5U651 963 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 CEP85Q6P2H3 762 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 C16orf86Q6ZW13 317 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 IL23AQ9NPF7 189 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 ATP8A2Q9NTI2 1148 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 YBX2Q9Y2T7 364 aaKnown RBP11.12□□□□□ -0.63
PACS1-214ENST00000533811 RIPK3Q9Y572 518 aa11.12□□□□□ -0.63
PACS1-214ENST00000533811 ZBBXA8MT70 800 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 ZBED4O75132 1171 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 FGBP02675 491 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 IFIT2P09913 472 aaKnown RBP11.11□□□□□ -0.63
PACS1-214ENST00000533811 CST5P28325 142 aaPredicted RBP11.11□□□□□ -0.63
PACS1-214ENST00000533811 RABGGTBP53611 331 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 CCL23P55773 120 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 BEX3Q00994 111 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 ARMCX2Q7L311 632 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
PACS1-214ENST00000533811 ANKRD35Q8N283 1001 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms