RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SH2D4AQ9H788 454 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 SLC28A3Q9HAS3 691 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 ARHGEF10LQ9HCE6 1279 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 IL23AQ9NPF7 189 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 TLR7Q9NYK1 1049 aaKnown RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 ZNF214Q9UL59 606 aaPredicted RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 YBX2Q9Y2T7 364 aaKnown RBP9.47□□□□□ -0.89
NXF1-215ENST00000533440 TRANK1O15050 2925 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 NAV1Q8NEY1 1877 aa9.47□□□□□ -0.89
NXF1-215ENST00000533440 A0A0U1RQG5 324 aaPredicted RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 VWA5AO00534 786 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 ERC2O15083 957 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 CD4P01730 458 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 ASGR1P07306 291 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 TFF2Q03403 129 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 ICA1Q05084 483 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 AAK1Q2M2I8 961 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 CLEC10AQ8IUN9 316 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 PCSK9Q8NBP7 692 aaKnown RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 EAF2Q96CJ1 260 aaPredicted RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 CCDC8Q9H0W5 538 aaPredicted RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 UPF3AQ9H1J1 476 aaKnown RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 MTIF3Q9H2K0 278 aaKnown RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 FBXO28Q9NVF7 368 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 MCM9Q9NXL9 1143 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 PPP1R9AQ9ULJ8 1098 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 NOP58Q9Y2X3 529 aaKnown RBP9.46□□□□□ -0.9
NXF1-215ENST00000533440 PIEZO1Q92508 2521 aa9.46□□□□□ -0.9
NXF1-215ENST00000533440 GBF1Q92538 1859 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 DNAJC25-GNG10A0A024R161 153 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 TLR3O15455 904 aaKnown RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 ADCY6O43306 1168 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 SURF6O75683 361 aaKnown RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 FGBP02675 491 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 C6orf222P0C671 652 aaPredicted RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 TRIM27P14373 513 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 AKR1B1P15121 316 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 POU3F3P20264 500 aaPredicted RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 CYP2C18P33260 490 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 GJA9P57773 515 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 NKX3-2P78367 333 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 OS9Q13438 667 aaPredicted RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 SLC43A3Q8NBI5 491 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 CRNKL1Q9BZJ0 848 aaKnown RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 EPHX3Q9H6B9 360 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 DCP1AQ9NPI6 582 aaPredicted RBP9.45□□□□□ -0.9
NXF1-215ENST00000533440 TNNQ9UQP3 1299 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 HCN4Q9Y3Q4 1203 aa9.45□□□□□ -0.9
NXF1-215ENST00000533440 APBB1O00213 710 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 CTAGE5O15320 804 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 CYP2D6P10635 497 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 KCNQ1P51787 676 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 ACVR2BQ13705 512 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
NXF1-215ENST00000533440 SDR42E1Q8WUS8 393 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 DYNLL2Q96FJ2 89 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 CCDC17Q96LX7 622 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 SPC25Q9HBM1 224 aa9.44□□□□□ -0.9
NXF1-215ENST00000533440 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
NXF1-215ENST00000533440 PRRC2BQ5JSZ5 2229 aaKnown RBP9.43□□□□□ -0.9
NXF1-215ENST00000533440 UMODL1Q5DID0 1318 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 TCRBV5S4A2TA0A5A2 114 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 IPO8O15397 1037 aaKnown RBP9.43□□□□□ -0.9
NXF1-215ENST00000533440 BCAR3O75815 825 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 EEF2P13639 858 aaKnown RBP9.43□□□□□ -0.9
NXF1-215ENST00000533440 PDE6AP16499 860 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 RABGGTBP53611 331 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 CCDC144BQ3MJ40 725 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 GNASQ5JWF2 1037 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 TMEM31Q5JXX7 168 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 OTOP2Q7RTS6 562 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 VWCEQ96DN2 955 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 DDX11Q96FC9 970 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 FGD4Q96M96 766 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 TEX13BQ9BXU2 312 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 ABHD16BQ9H3Z7 469 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
NXF1-215ENST00000533440 PCDHA11Q9Y5I1 949 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 MTCH2Q9Y6C9 303 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 MYH8P13535 1937 aa9.43□□□□□ -0.9
NXF1-215ENST00000533440 ZNF532Q9HCE3 1301 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 TLL1O43897 1013 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 GPR37L1O60883 481 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 MYOGP15173 224 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 CDK8P49336 464 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 TTF1Q15361 905 aaPredicted RBP9.42□□□□□ -0.9
NXF1-215ENST00000533440 FAM83BQ5T0W9 1011 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 SLC9C2Q5TAH2 1124 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 LCORLQ8N3X6 602 aa9.42□□□□□ -0.9
NXF1-215ENST00000533440 KATNBL1Q9H079 304 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms