RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 POLD1P28340 1107 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 PDE6BP35913 854 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 PRR16Q569H4 304 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 TPH2Q8IWU9 490 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 ARHGEF40Q8TER5 1519 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 LRRC41Q15345 812 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
BDNF-218ENST00000533246 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 SLC44A5Q8NCS7 719 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 JPH2Q9BR39 696 aaPredicted RBP13.58□□□□□ -0.24
BDNF-218ENST00000533246 CDC27P30260 824 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 FOXO4P98177 505 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 COA7Q96BR5 231 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 CPS1P31327 1500 aa13.58□□□□□ -0.24
BDNF-218ENST00000533246 APBA3O96018 575 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 MMP1P03956 469 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 TBC1D10BQ4KMP7 808 aaPredicted RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 SPATA1Q5VX52 437 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 ST7Q9NRC1 585 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 GOLGA6L10A0A0M3HER8 536 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 GCNT3O95395 438 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 RPL13P26373 211 aaKnown RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 ATG9AQ7Z3C6 839 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 TAOK3Q9H2K8 898 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 PSTPIP2Q9H939 334 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 RPN1P04843 607 aaKnown RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 OAS2P29728 719 aaKnown RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 HPDP32754 393 aaPredicted RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 RNF26Q9BY78 433 aaPredicted RBP13.57□□□□□ -0.24
BDNF-218ENST00000533246 DNM3Q9UQ16 869 aa13.57□□□□□ -0.24
BDNF-218ENST00000533246 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 TTC36A6NLP5 189 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 LIG3P49916 1009 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 MECOMQ03112 1051 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 KLHL30Q0D2K2 578 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 HDXQ7Z353 690 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 IFIH1Q9BYX4 1025 aaKnown RBP13.56□□□□□ -0.24
BDNF-218ENST00000533246 MED14O60244 1454 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 NEDD4P46934 1319 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 GOLGA6L7A0A1B0GV03 622 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 SORBS3O60504 671 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 UBXN2AP68543 259 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 ARHGAP44Q17R89 818 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 CCDC144BQ3MJ40 725 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 MMS22LQ6ZRQ5 1243 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 EBAG9O00559 213 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 CEP104O60308 925 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 ZMYND10O75800 440 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 OR52Z1P0C646 297 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
BDNF-218ENST00000533246 CFAP58Q5T655 872 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 TEKT1Q969V4 418 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 FOXP1Q9H334 677 aaPredicted RBP13.56□□□□□ -0.24
BDNF-218ENST00000533246 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
BDNF-218ENST00000533246 POLD4Q9HCU8 107 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 ATP10DQ9P241 1426 aa13.56□□□□□ -0.24
BDNF-218ENST00000533246 FOXN1O15353 648 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 BUB1O43683 1085 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 TRIM37O94972 964 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 GOLGA5Q8TBA6 731 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 PPP1R13BQ96KQ4 1090 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 BIRC3Q13489 604 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 SLC9C1Q4G0N8 1177 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 DBNDD1Q9H9R9 158 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 FRMD4BQ9Y2L6 1034 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 ADGRL3Q9HAR2 1447 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 PTPRMP28827 1452 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 ARHGEF35A5YM69 484 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 H0YIN7 160 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 HGSO14964 777 aaPredicted RBP13.55□□□□□ -0.24
BDNF-218ENST00000533246 MAGEA9P43362 315 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 CACNB3P54284 484 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 TRAF1Q13077 416 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 C8orf74Q6P047 294 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
BDNF-218ENST00000533246 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
BDNF-218ENST00000533246 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 B4DLN1 442 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 EXOC3O60645 756 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 PPP6R2O75170 966 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 EPB41P11171 864 aaKnown RBP13.55□□□□□ -0.24
BDNF-218ENST00000533246 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
BDNF-218ENST00000533246 HAUS3Q68CZ6 603 aa13.55□□□□□ -0.24
BDNF-218ENST00000533246 GPBP1Q86WP2 473 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms