RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 VWA5AO00534 786 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 CSF2RAP15509 400 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 IGFBP4P22692 258 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 RAB30Q15771 203 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 LCORLQ8N3X6 602 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
CTNND1-235ENST00000533189 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 MCM3APO60318 1980 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
CTNND1-235ENST00000533189 TLR3O15455 904 aaKnown RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 CDK8P49336 464 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 CCDC85BQ15834 202 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 CCSAPQ6IQ19 270 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 C16orf59Q7L2K0 433 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 FTSJ3Q8IY81 847 aaKnown RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 FAM122AQ96E09 287 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 TSPYL2Q9H2G4 693 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 MTIF3Q9H2K0 278 aaKnown RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 ARMT1Q9H993 441 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 ATP8A2Q9NTI2 1148 aa12.87□□□□□ -0.35
CTNND1-235ENST00000533189 ZNF214Q9UL59 606 aaPredicted RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 TCF20Q9UGU0 1960 aaKnown RBP12.87□□□□□ -0.35
CTNND1-235ENST00000533189 A0A0U1RQG5 324 aaPredicted RBP12.86□□□□□ -0.35
CTNND1-235ENST00000533189 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 ARVCFO00192 962 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 GOLIM4O00461 696 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 ACRP10323 421 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 CST5P28325 142 aaPredicted RBP12.86□□□□□ -0.35
CTNND1-235ENST00000533189 PLA2G5P39877 138 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 CDK7P50613 346 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 RASIP1Q5U651 963 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 SNRNP48Q6IEG0 339 aaKnown RBP12.86□□□□□ -0.35
CTNND1-235ENST00000533189 ITPRIPQ8IWB1 547 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 DDRGK1Q96HY6 314 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CTNND1-235ENST00000533189 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 EXOC6BQ9Y2D4 811 aa12.86□□□□□ -0.35
CTNND1-235ENST00000533189 CTDP1Q9Y5B0 961 aaPredicted RBP12.86□□□□□ -0.35
CTNND1-235ENST00000533189 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 PRKAB2O43741 272 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 SNAI1O95863 264 aaPredicted RBP12.85□□□□□ -0.35
CTNND1-235ENST00000533189 ASGR1P07306 291 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 ACVR2BQ13705 512 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 ADGRE1Q14246 886 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 MAMDC4Q6UXC1 1216 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 REPS2Q8NFH8 660 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 SLC28A3Q9HAS3 691 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
CTNND1-235ENST00000533189 MYH7P12883 1935 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 CYP2D7A0A087X1C5 515 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 MBD4O95243 580 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 GJA9P57773 515 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
CTNND1-235ENST00000533189 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.84□□□□□ -0.35
CTNND1-235ENST00000533189 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 NKX2-4Q9H2Z4 354 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
CTNND1-235ENST00000533189 TRANK1O15050 2925 aa12.84□□□□□ -0.35
CTNND1-235ENST00000533189 DNAJC25-GNG10A0A024R161 153 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 USP17L21D6R901 530 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 ZBED4O75132 1171 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 FGBP02675 491 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 CYP2C18P33260 490 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
CTNND1-235ENST00000533189 CCDC144BQ3MJ40 725 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 CPXCR1Q8N123 301 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 CLASRPQ8N2M8 674 aaKnown RBP12.83□□□□□ -0.36
CTNND1-235ENST00000533189 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 RHPN1Q8TCX5 695 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 C1QTNF1Q9BXJ1 281 aa12.83□□□□□ -0.36
CTNND1-235ENST00000533189 UPF3AQ9H1J1 476 aaKnown RBP12.83□□□□□ -0.36
CTNND1-235ENST00000533189 REV3LO60673 3130 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 MYH4Q9Y623 1939 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 SMIM22K7EJ46 135 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 IFIT2P09913 472 aaKnown RBP12.82□□□□□ -0.36
CTNND1-235ENST00000533189 ADD2P35612 726 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 AAK1Q2M2I8 961 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
CTNND1-235ENST00000533189 PRPF38AQ8NAV1 312 aaKnown RBP12.82□□□□□ -0.36
CTNND1-235ENST00000533189 NUP88Q99567 741 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms