RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 RNF41Q9H4P4 317 aaPredicted RBP35.79■■■■□ 3.32
SSSCA1-207ENST00000533115 TCP11L1Q9NUJ3 509 aa35.79■■■■□ 3.32
SSSCA1-207ENST00000533115 CTDP1Q9Y5B0 961 aaPredicted RBP35.79■■■■□ 3.32
SSSCA1-207ENST00000533115 TMEM232C9JQI7 657 aa35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 IGHA2P01877 340 aa35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 MCCP23508 829 aa35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 SLC1A4P43007 532 aa35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 OLFML2BQ68BL8 750 aa35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 MMP19Q99542 508 aa35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 ISY1Q9ULR0 285 aaKnown RBP35.78■■■■□ 3.32
SSSCA1-207ENST00000533115 ATP2A1O14983 1001 aa35.77■■■■□ 3.32
SSSCA1-207ENST00000533115 SNRNP48Q6IEG0 339 aaKnown RBP35.77■■■■□ 3.32
SSSCA1-207ENST00000533115 ANKLE1Q8NAG6 615 aa35.77■■■■□ 3.32
SSSCA1-207ENST00000533115 SLC38A10Q9HBR0 1119 aa35.77■■■■□ 3.32
SSSCA1-207ENST00000533115 CYP2C19P33261 490 aa35.76■■■■□ 3.32
SSSCA1-207ENST00000533115 STAT2P52630 851 aa35.76■■■■□ 3.32
SSSCA1-207ENST00000533115 CHMP4CQ96CF2 233 aa35.76■■■■□ 3.32
SSSCA1-207ENST00000533115 HTATIP2Q9BUP3 242 aa35.76■■■■□ 3.32
SSSCA1-207ENST00000533115 OGDHLQ9ULD0 1010 aa35.76■■■■□ 3.32
SSSCA1-207ENST00000533115 KCTD2Q14681 263 aa35.75■■■■□ 3.31
SSSCA1-207ENST00000533115 FAM160B2Q86V87 743 aa35.75■■■■□ 3.31
SSSCA1-207ENST00000533115 CPXCR1Q8N123 301 aa35.75■■■■□ 3.31
SSSCA1-207ENST00000533115 CHURC1Q8WUH1 139 aa35.75■■■■□ 3.31
SSSCA1-207ENST00000533115 IL25Q9H293 177 aa35.75■■■■□ 3.31
SSSCA1-207ENST00000533115 LAMA4Q16363 1823 aa35.74■■■■□ 3.31
SSSCA1-207ENST00000533115 RCSD1Q6JBY9 416 aa35.74■■■■□ 3.31
SSSCA1-207ENST00000533115 RIPK3Q9Y572 518 aa35.74■■■■□ 3.31
SSSCA1-207ENST00000533115 ZNFX1Q9P2E3 1918 aaKnown RBP35.74■■■■□ 3.31
SSSCA1-207ENST00000533115 FDX1P10109 184 aa35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 TOP1P11387 765 aaKnown RBP35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 IKQ13123 557 aaPredicted RBP35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 LHX8Q68G74 356 aa35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 ESR2Q92731 530 aa35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 DPF3Q92784 378 aa35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 PAWRQ96IZ0 340 aaKnown RBP35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 RAVER2Q9HCJ3 691 aaKnown RBP35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 CTNNA3Q9UI47 895 aa35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 NEDD4P46934 1319 aa35.73■■■■□ 3.31
SSSCA1-207ENST00000533115 PLA2G6O60733 806 aa35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 OAZ1P54368 228 aa35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 KCTD1Q719H9 257 aa35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 DIS3LQ8TF46 1054 aaKnown RBP35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 MAML3Q96JK9 1138 aa35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 TMEM47Q9BQJ4 181 aa35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 RAD50Q92878 1312 aa35.72■■■■□ 3.31
SSSCA1-207ENST00000533115 PGK2P07205 417 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 CHMLP26374 656 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 SLC4A3P48751 1232 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 NT5C2P49902 561 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 IMMTQ16891 758 aaKnown RBP35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 DCAF4Q8WV16 495 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 RUFY2Q8WXA3 655 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 MTMR7Q9Y216 660 aa35.71■■■■□ 3.31
SSSCA1-207ENST00000533115 RASGRP2Q7LDG7 609 aa35.7■■■■□ 3.31
SSSCA1-207ENST00000533115 NECAB2Q7Z6G3 386 aa35.7■■■■□ 3.31
SSSCA1-207ENST00000533115 TRPV1Q8NER1 839 aa35.7■■■■□ 3.31
SSSCA1-207ENST00000533115 TTC14Q96N46 770 aa35.7■■■■□ 3.31
SSSCA1-207ENST00000533115 CYBAP13498 195 aa35.69■■■■□ 3.3
SSSCA1-207ENST00000533115 CNGA1P29973 690 aa35.69■■■■□ 3.3
SSSCA1-207ENST00000533115 MNX1P50219 401 aaPredicted RBP35.69■■■■□ 3.3
SSSCA1-207ENST00000533115 DIS3Q9Y2L1 958 aaKnown RBP35.69■■■■□ 3.3
SSSCA1-207ENST00000533115 ZNF792Q3KQV3 632 aa35.68■■■■□ 3.3
SSSCA1-207ENST00000533115 DDX20Q9UHI6 824 aaKnown RBP35.68■■■■□ 3.3
SSSCA1-207ENST00000533115 CCDC96Q2M329 555 aa35.67■■■■□ 3.3
SSSCA1-207ENST00000533115 MSCO60682 206 aa35.66■■■■□ 3.3
SSSCA1-207ENST00000533115 FBXO40Q9UH90 709 aa35.66■■■■□ 3.3
SSSCA1-207ENST00000533115 KDM4AO75164 1064 aa35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 CHST13Q8NET6 341 aa35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 DDX11Q96FC9 970 aa35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 ZKSCAN3Q9BRR0 538 aa35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 PRR12Q9ULL5 1215 aa35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 PLXNA1Q9UIW2 1896 aa35.65■■■■□ 3.3
SSSCA1-207ENST00000533115 CENPQQ7L2Z9 268 aaPredicted RBP35.64■■■■□ 3.3
SSSCA1-207ENST00000533115 C11orf49Q9H6J7 331 aa35.64■■■■□ 3.3
SSSCA1-207ENST00000533115 ZNF536O15090 1300 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 B4E1Z4 1266 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 CCDC178Q5BJE1 867 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 PRAMEF19Q5SWL8 479 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 IQCA1Q86XH1 822 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 DGKHQ86XP1 1220 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 TINF2Q9BSI4 451 aa35.63■■■■□ 3.29
SSSCA1-207ENST00000533115 FRMPD3Q5JV73 1810 aa35.62■■■■□ 3.29
SSSCA1-207ENST00000533115 H0YGN5 161 aa35.62■■■■□ 3.29
SSSCA1-207ENST00000533115 BTNL9Q6UXG8 535 aa35.62■■■■□ 3.29
SSSCA1-207ENST00000533115 AGBL1Q96MI9 1066 aa35.62■■■■□ 3.29
SSSCA1-207ENST00000533115 KRT23Q9C075 422 aa35.62■■■■□ 3.29
SSSCA1-207ENST00000533115 CEP290O15078 2479 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 DNAJC25-GNG10A0A024R161 153 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 PDHBP11177 359 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 TTBK2Q6IQ55 1244 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 ANKRD35Q8N283 1001 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 CNNM2Q9H8M5 875 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 HOMER2Q9NSB8 354 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 NRBP1Q9UHY1 535 aa35.61■■■■□ 3.29
SSSCA1-207ENST00000533115 FRMPD2Q68DX3 1309 aaPredicted RBP35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 SGSM2O43147 1006 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 SEPT4O43236 478 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 SNAP25P60880 206 aa35.6■■■■□ 3.29
SSSCA1-207ENST00000533115 PTH1RQ03431 593 aa35.6■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms