RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 ALX1Q15699 326 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 ZNF589Q86UQ0 364 aaPredicted RBP27.32■■□□□ 1.96
LTBP3-220ENST00000532661 PLEKHM2Q8IWE5 1019 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 CPXCR1Q8N123 301 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 TEX13BQ9BXU2 312 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 IL17RBQ9NRM6 502 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 PCDH10Q9P2E7 1040 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 ANAPC4Q9UJX5 808 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 SYNPO2Q9UMS6 1093 aa27.32■■□□□ 1.96
LTBP3-220ENST00000532661 SUPT16HQ9Y5B9 1047 aaKnown RBP27.32■■□□□ 1.96
LTBP3-220ENST00000532661 ZBED4O75132 1171 aa27.31■■□□□ 1.96
LTBP3-220ENST00000532661 FGAP02671 866 aa27.31■■□□□ 1.96
LTBP3-220ENST00000532661 BMP3P12645 472 aa27.31■■□□□ 1.96
LTBP3-220ENST00000532661 LRRC26Q2I0M4 334 aa27.31■■□□□ 1.96
LTBP3-220ENST00000532661 ZNF792Q3KQV3 632 aa27.31■■□□□ 1.96
LTBP3-220ENST00000532661 RAVER2Q9HCJ3 691 aaKnown RBP27.31■■□□□ 1.96
LTBP3-220ENST00000532661 FEM1BQ9UK73 627 aa27.31■■□□□ 1.96
LTBP3-220ENST00000532661 TSPY2A6NKD2 308 aa27.3■■□□□ 1.96
LTBP3-220ENST00000532661 SYN1P17600 705 aa27.3■■□□□ 1.96
LTBP3-220ENST00000532661 COPB2P35606 906 aa27.3■■□□□ 1.96
LTBP3-220ENST00000532661 SLC38A10Q9HBR0 1119 aa27.3■■□□□ 1.96
LTBP3-220ENST00000532661 MYH4Q9Y623 1939 aa27.29■■□□□ 1.96
LTBP3-220ENST00000532661 SEPT4O43236 478 aa27.29■■□□□ 1.96
LTBP3-220ENST00000532661 RANBP6O60518 1105 aaKnown RBP27.29■■□□□ 1.96
LTBP3-220ENST00000532661 HSPD1P10809 573 aaKnown RBP27.29■■□□□ 1.96
LTBP3-220ENST00000532661 SENP6Q9GZR1 1112 aaPredicted RBP27.29■■□□□ 1.96
LTBP3-220ENST00000532661 ISY1Q9ULR0 285 aaKnown RBP27.29■■□□□ 1.96
LTBP3-220ENST00000532661 STX8Q9UNK0 236 aa27.29■■□□□ 1.96
LTBP3-220ENST00000532661 TMEM232C9JQI7 657 aa27.28■■□□□ 1.96
LTBP3-220ENST00000532661 MCCP23508 829 aa27.28■■□□□ 1.96
LTBP3-220ENST00000532661 GJC2Q5T442 439 aaPredicted RBP27.28■■□□□ 1.96
LTBP3-220ENST00000532661 RASGRP2Q7LDG7 609 aa27.28■■□□□ 1.96
LTBP3-220ENST00000532661 TICAM2Q86XR7 235 aa27.28■■□□□ 1.96
LTBP3-220ENST00000532661 TINF2Q9BSI4 451 aa27.28■■□□□ 1.96
LTBP3-220ENST00000532661 OSBPL3Q9H4L5 887 aa27.28■■□□□ 1.96
LTBP3-220ENST00000532661 CTDP1Q9Y5B0 961 aaPredicted RBP27.28■■□□□ 1.96
LTBP3-220ENST00000532661 ATP2A1O14983 1001 aa27.27■■□□□ 1.96
LTBP3-220ENST00000532661 TAL1P17542 331 aaPredicted RBP27.27■■□□□ 1.96
LTBP3-220ENST00000532661 SDSP20132 328 aa27.27■■□□□ 1.96
LTBP3-220ENST00000532661 DIS3Q9Y2L1 958 aaKnown RBP27.27■■□□□ 1.96
LTBP3-220ENST00000532661 FRMPD3Q5JV73 1810 aa27.27■■□□□ 1.96
LTBP3-220ENST00000532661 DNAH12Q6ZR08 3092 aa27.27■■□□□ 1.96
LTBP3-220ENST00000532661 CCDC171Q6TFL3 1326 aa27.26■■□□□ 1.95
LTBP3-220ENST00000532661 DNM1LO00429 736 aa27.26■■□□□ 1.95
LTBP3-220ENST00000532661 ORC4O43929 436 aa27.26■■□□□ 1.95
LTBP3-220ENST00000532661 FGRP09769 529 aa27.26■■□□□ 1.95
LTBP3-220ENST00000532661 GMCL1Q96IK5 515 aa27.26■■□□□ 1.95
LTBP3-220ENST00000532661 TOMM22Q9NS69 142 aa27.26■■□□□ 1.95
LTBP3-220ENST00000532661 ATN1P54259 1190 aaPredicted RBP27.25■■□□□ 1.95
LTBP3-220ENST00000532661 HAND2P61296 217 aa27.25■■□□□ 1.95
LTBP3-220ENST00000532661 RRP12Q5JTH9 1297 aaKnown RBP27.25■■□□□ 1.95
LTBP3-220ENST00000532661 DDX11Q96FC9 970 aa27.25■■□□□ 1.95
LTBP3-220ENST00000532661 GDF15Q99988 308 aa27.25■■□□□ 1.95
LTBP3-220ENST00000532661 ZNFX1Q9P2E3 1918 aaKnown RBP27.25■■□□□ 1.95
LTBP3-220ENST00000532661 MYCNP04198 464 aaPredicted RBP27.24■■□□□ 1.95
LTBP3-220ENST00000532661 SLC1A4P43007 532 aa27.24■■□□□ 1.95
LTBP3-220ENST00000532661 KCTD1Q719H9 257 aa27.24■■□□□ 1.95
LTBP3-220ENST00000532661 STAG1Q8WVM7 1258 aa27.24■■□□□ 1.95
LTBP3-220ENST00000532661 MTMR7Q9Y216 660 aa27.24■■□□□ 1.95
LTBP3-220ENST00000532661 DNAJC25-GNG10A0A024R161 153 aa27.23■■□□□ 1.95
LTBP3-220ENST00000532661 NOVP48745 357 aa27.23■■□□□ 1.95
LTBP3-220ENST00000532661 STAT2P52630 851 aa27.23■■□□□ 1.95
LTBP3-220ENST00000532661 PPP4R3BQ5MIZ7 849 aa27.23■■□□□ 1.95
LTBP3-220ENST00000532661 ARRDC4Q8NCT1 418 aa27.23■■□□□ 1.95
LTBP3-220ENST00000532661 ZNF865P0CJ78 1059 aaPredicted RBP27.22■■□□□ 1.95
LTBP3-220ENST00000532661 MAGEA10P43363 369 aaPredicted RBP27.22■■□□□ 1.95
LTBP3-220ENST00000532661 SNAP25P60880 206 aa27.22■■□□□ 1.95
LTBP3-220ENST00000532661 IKQ13123 557 aaPredicted RBP27.22■■□□□ 1.95
LTBP3-220ENST00000532661 RCSD1Q6JBY9 416 aa27.22■■□□□ 1.95
LTBP3-220ENST00000532661 FAM160B2Q86V87 743 aa27.22■■□□□ 1.95
LTBP3-220ENST00000532661 CHURC1Q8WUH1 139 aa27.22■■□□□ 1.95
LTBP3-220ENST00000532661 HOMER2Q9NSB8 354 aa27.22■■□□□ 1.95
LTBP3-220ENST00000532661 NRBP1Q9UHY1 535 aa27.22■■□□□ 1.95
LTBP3-220ENST00000532661 ZNF536O15090 1300 aa27.21■■□□□ 1.95
LTBP3-220ENST00000532661 OAZ1P54368 228 aa27.21■■□□□ 1.95
LTBP3-220ENST00000532661 IRX6P78412 446 aaPredicted RBP27.21■■□□□ 1.95
LTBP3-220ENST00000532661 CWC27Q6UX04 472 aaKnown RBP27.21■■□□□ 1.95
LTBP3-220ENST00000532661 ANKRD35Q8N283 1001 aa27.21■■□□□ 1.95
LTBP3-220ENST00000532661 AGBL1Q96MI9 1066 aa27.21■■□□□ 1.95
LTBP3-220ENST00000532661 ZMYM6O95789 1325 aa27.2■■□□□ 1.95
LTBP3-220ENST00000532661 LRRC41Q15345 812 aa27.2■■□□□ 1.94
LTBP3-220ENST00000532661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.2■■□□□ 1.94
LTBP3-220ENST00000532661 CHST13Q8NET6 341 aa27.2■■□□□ 1.94
LTBP3-220ENST00000532661 LENG1Q96BZ8 264 aaPredicted RBP27.2■■□□□ 1.94
LTBP3-220ENST00000532661 KBTBD13C9JR72 458 aa27.19■■□□□ 1.94
LTBP3-220ENST00000532661 PLA2G6O60733 806 aa27.19■■□□□ 1.94
LTBP3-220ENST00000532661 SNAI1O95863 264 aaPredicted RBP27.19■■□□□ 1.94
LTBP3-220ENST00000532661 FDX1P10109 184 aa27.19■■□□□ 1.94
LTBP3-220ENST00000532661 TBC1D10CQ8IV04 446 aa27.19■■□□□ 1.94
LTBP3-220ENST00000532661 FGD4Q96M96 766 aa27.19■■□□□ 1.94
LTBP3-220ENST00000532661 PRR12Q9ULL5 1215 aa27.19■■□□□ 1.94
LTBP3-220ENST00000532661 A0A1W2PPC1 479 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 RARBP10826 455 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 BMP8BP34820 402 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 ADCYAP1R1P41586 468 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 AKNAD1Q5T1N1 836 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 CCDC174Q6PII3 467 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 MAMDC4Q6UXC1 1216 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 FERMT2Q96AC1 680 aa27.18■■□□□ 1.94
LTBP3-220ENST00000532661 TMEM47Q9BQJ4 181 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms