RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 NEDD4P46934 1319 aa27.1■■□□□ 1.93
CAPN1-222ENST00000532285 TMEM232C9JQI7 657 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 TOP1P11387 765 aaKnown RBP27.09■■□□□ 1.93
CAPN1-222ENST00000532285 FCER1AP12319 257 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 PRKAR2AP13861 404 aaKnown RBP27.09■■□□□ 1.93
CAPN1-222ENST00000532285 MAP3K21Q5TCX8 1036 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 RCSD1Q6JBY9 416 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 FAM160B2Q86V87 743 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 TTC14Q96N46 770 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 DEFB118Q96PH6 123 aa27.09■■□□□ 1.93
CAPN1-222ENST00000532285 ISY1Q9ULR0 285 aaKnown RBP27.09■■□□□ 1.93
CAPN1-222ENST00000532285 PLXNA1Q9UIW2 1896 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 ATP2A1O14983 1001 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 PLA2G6O60733 806 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 FDX1P10109 184 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 STAT2P52630 851 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 NPLOC4Q8TAT6 608 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 TMEM47Q9BQJ4 181 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 TEX13BQ9BXU2 312 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 SLC38A10Q9HBR0 1119 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 SLC5A4Q9NY91 659 aa27.08■■□□□ 1.93
CAPN1-222ENST00000532285 SGSM2O43147 1006 aa27.07■■□□□ 1.92
CAPN1-222ENST00000532285 CACNB2Q08289 660 aaPredicted RBP27.07■■□□□ 1.92
CAPN1-222ENST00000532285 MFSD14CQ5VZR4 134 aa27.07■■□□□ 1.92
CAPN1-222ENST00000532285 DCAF4Q8WV16 495 aa27.07■■□□□ 1.92
CAPN1-222ENST00000532285 CCDC136Q96JN2 1154 aa27.07■■□□□ 1.92
CAPN1-222ENST00000532285 FLRT1Q9NZU1 646 aa27.07■■□□□ 1.92
CAPN1-222ENST00000532285 TFRCP02786 760 aaKnown RBP27.06■■□□□ 1.92
CAPN1-222ENST00000532285 IKQ13123 557 aaPredicted RBP27.06■■□□□ 1.92
CAPN1-222ENST00000532285 CCDC178Q5BJE1 867 aa27.06■■□□□ 1.92
CAPN1-222ENST00000532285 SNRNP48Q6IEG0 339 aaKnown RBP27.06■■□□□ 1.92
CAPN1-222ENST00000532285 CHMP4CQ96CF2 233 aa27.06■■□□□ 1.92
CAPN1-222ENST00000532285 CNNM2Q9H8M5 875 aa27.06■■□□□ 1.92
CAPN1-222ENST00000532285 COBLO75128 1261 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 KDM4AO75164 1064 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 NEFLP07196 543 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 OAZ1P54368 228 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 KCTD1Q719H9 257 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 IQCA1Q86XH1 822 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 CPXCR1Q8N123 301 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 MMP19Q99542 508 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 KRT23Q9C075 422 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 CRISPLD2Q9H0B8 497 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 MTMR7Q9Y216 660 aa27.05■■□□□ 1.92
CAPN1-222ENST00000532285 B4E1Z4 1266 aa27.04■■□□□ 1.92
CAPN1-222ENST00000532285 PTH1RQ03431 593 aa27.04■■□□□ 1.92
CAPN1-222ENST00000532285 KCTD2Q14681 263 aa27.04■■□□□ 1.92
CAPN1-222ENST00000532285 CCDC96Q2M329 555 aa27.03■■□□□ 1.92
CAPN1-222ENST00000532285 OLFML2BQ68BL8 750 aa27.03■■□□□ 1.92
CAPN1-222ENST00000532285 DGKHQ86XP1 1220 aa27.03■■□□□ 1.92
CAPN1-222ENST00000532285 ZKSCAN3Q9BRR0 538 aa27.03■■□□□ 1.92
CAPN1-222ENST00000532285 RAVER2Q9HCJ3 691 aaKnown RBP27.03■■□□□ 1.92
CAPN1-222ENST00000532285 ZSWIM5Q9P217 1185 aa27.03■■□□□ 1.92
CAPN1-222ENST00000532285 U3KPZ7 1027 aaPredicted RBP27.03■■□□□ 1.92
CAPN1-222ENST00000532285 IGHA2P01877 340 aa27.02■■□□□ 1.92
CAPN1-222ENST00000532285 BMP2KLQ5H9B9 411 aa27.02■■□□□ 1.92
CAPN1-222ENST00000532285 RIPK3Q9Y572 518 aa27.02■■□□□ 1.92
CAPN1-222ENST00000532285 SLC4A3P48751 1232 aa27.01■■□□□ 1.91
CAPN1-222ENST00000532285 RASGRP2Q7LDG7 609 aa27.01■■□□□ 1.91
CAPN1-222ENST00000532285 UBE2Q1Q7Z7E8 422 aa27.01■■□□□ 1.91
CAPN1-222ENST00000532285 SKAP1Q86WV1 359 aa27.01■■□□□ 1.91
CAPN1-222ENST00000532285 FRMPD3Q5JV73 1810 aa27■■□□□ 1.91
CAPN1-222ENST00000532285 FARP2O94887 1054 aaPredicted RBP27■■□□□ 1.91
CAPN1-222ENST00000532285 CCND3P30281 292 aaPredicted RBP27■■□□□ 1.91
CAPN1-222ENST00000532285 CYP2C19P33261 490 aa27■■□□□ 1.91
CAPN1-222ENST00000532285 MAML3Q96JK9 1138 aa27■■□□□ 1.91
CAPN1-222ENST00000532285 ZSCAN10Q96SZ4 725 aaPredicted RBP27■■□□□ 1.91
CAPN1-222ENST00000532285 FBXO40Q9UH90 709 aa27■■□□□ 1.91
CAPN1-222ENST00000532285 PRR12Q9ULL5 1215 aa27■■□□□ 1.91
CAPN1-222ENST00000532285 DIS3Q9Y2L1 958 aaKnown RBP27■■□□□ 1.91
CAPN1-222ENST00000532285 PDHBP11177 359 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 TRDNQ13061 729 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 BTNL9Q6UXG8 535 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.99■■□□□ 1.91
CAPN1-222ENST00000532285 ANKLE1Q8NAG6 615 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 CHST13Q8NET6 341 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 ANKS1AQ92625 1134 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 MAP4K1Q92918 833 aa26.99■■□□□ 1.91
CAPN1-222ENST00000532285 PGK2P07205 417 aa26.98■■□□□ 1.91
CAPN1-222ENST00000532285 CYP21A2P08686 494 aa26.98■■□□□ 1.91
CAPN1-222ENST00000532285 ZNF792Q3KQV3 632 aa26.98■■□□□ 1.91
CAPN1-222ENST00000532285 KIAA1211Q6ZU35 1233 aa26.98■■□□□ 1.91
CAPN1-222ENST00000532285 DDX11Q96FC9 970 aa26.98■■□□□ 1.91
CAPN1-222ENST00000532285 OGDHLQ9ULD0 1010 aa26.98■■□□□ 1.91
CAPN1-222ENST00000532285 ZNF536O15090 1300 aa26.97■■□□□ 1.91
CAPN1-222ENST00000532285 SNHG28P0DPA3 235 aa26.97■■□□□ 1.91
CAPN1-222ENST00000532285 TTBK2Q6IQ55 1244 aa26.97■■□□□ 1.91
CAPN1-222ENST00000532285 ENAHQ8N8S7 591 aaPredicted RBP26.97■■□□□ 1.91
CAPN1-222ENST00000532285 UBAC1Q9BSL1 405 aa26.97■■□□□ 1.91
CAPN1-222ENST00000532285 KAT14Q9H8E8 782 aa26.97■■□□□ 1.91
CAPN1-222ENST00000532285 GPCPD1Q9NPB8 672 aa26.97■■□□□ 1.91
CAPN1-222ENST00000532285 TNKSO95271 1327 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 FRMPD2Q68DX3 1309 aaPredicted RBP26.96■■□□□ 1.91
CAPN1-222ENST00000532285 CNGA1P29973 690 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 ZNF543Q08ER8 600 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 TKFCQ3LXA3 575 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 SYDE2Q5VT97 1194 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 LHX8Q68G74 356 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 PNMA1Q8ND90 353 aa26.96■■□□□ 1.91
CAPN1-222ENST00000532285 AGBL1Q96MI9 1066 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms