RNA–Protein interactions for RNA: ENST00000532127.5

PUF60-219, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-219ENST00000532127 SMARCA1P28370 1054 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 ADD1P35611 737 aaKnown RBP22.69■■□□□ 1.22
PUF60-219ENST00000532127 VEGFBP49765 207 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 IRX3P78415 501 aaPredicted RBP22.69■■□□□ 1.22
PUF60-219ENST00000532127 SYDE2Q5VT97 1194 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 TTBK2Q6IQ55 1244 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 NECAB1Q8N987 351 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 PTPN18Q99952 460 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 SPZ1Q9BXG8 430 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 FBXO28Q9NVF7 368 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 PPP1R9AQ9ULJ8 1098 aa22.69■■□□□ 1.22
PUF60-219ENST00000532127 PARP14Q460N5 1801 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 AOC2O75106 756 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 CDKL5O76039 1030 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 MAP2K2P36507 400 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 ANP32AP39687 249 aaKnown RBP22.68■■□□□ 1.22
PUF60-219ENST00000532127 TM4SF4P48230 202 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 COG2Q14746 738 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 OTUD7BQ6GQQ9 843 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 FAM43AQ8N2R8 423 aa22.68■■□□□ 1.22
PUF60-219ENST00000532127 PRPF38AQ8NAV1 312 aaKnown RBP22.68■■□□□ 1.22
PUF60-219ENST00000532127 ASCC2Q9H1I8 757 aaPredicted RBP22.68■■□□□ 1.22
PUF60-219ENST00000532127 RLFQ13129 1914 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 PDHXO00330 501 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 SLC16A2P36021 539 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 BECN1Q14457 450 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 IFNL1Q8IU54 200 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 CCDC83Q8IWF9 413 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 SRBD1Q8N5C6 995 aaKnown RBP22.67■■□□□ 1.22
PUF60-219ENST00000532127 ZIC5Q96T25 663 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 HOXC10Q9NYD6 342 aa22.67■■□□□ 1.22
PUF60-219ENST00000532127 CNTNAP5Q8WYK1 1306 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 IGF2BP3O00425 579 aaKnown RBP eCLIP22.66■■□□□ 1.22
PUF60-219ENST00000532127 IFNAR1P17181 557 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 FUT2Q10981 343 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 ST3GAL1Q11201 340 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 NTRK3Q16288 839 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 KIFC2Q96AC6 838 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 PARK7Q99497 189 aaKnown RBP22.66■■□□□ 1.22
PUF60-219ENST00000532127 UBA5Q9GZZ9 404 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 RIOX1Q9H6W3 641 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 PRR12Q9ULL5 1215 aa22.66■■□□□ 1.22
PUF60-219ENST00000532127 FDX1P10109 184 aa22.65■■□□□ 1.22
PUF60-219ENST00000532127 DSG3P32926 999 aa22.65■■□□□ 1.22
PUF60-219ENST00000532127 NBPF11Q86T75 865 aa22.65■■□□□ 1.22
PUF60-219ENST00000532127 ADGRF4Q8IZF3 695 aa22.65■■□□□ 1.22
PUF60-219ENST00000532127 CMTR1Q8N1G2 835 aaKnown RBP22.65■■□□□ 1.22
PUF60-219ENST00000532127 GTF3C2Q8WUA4 911 aaPredicted RBP22.65■■□□□ 1.22
PUF60-219ENST00000532127 LLPHQ9BRT6 129 aaKnown RBP22.65■■□□□ 1.22
PUF60-219ENST00000532127 SPDYE16A6NNV3 312 aaPredicted RBP22.64■■□□□ 1.21
PUF60-219ENST00000532127 CYTH3O43739 400 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 CUL4AQ13619 759 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 SLC35G1Q2M3R5 365 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 SAMD1Q6SPF0 538 aaPredicted RBP22.64■■□□□ 1.21
PUF60-219ENST00000532127 LBX2Q6XYB7 198 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 ATG4CQ96DT6 458 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 JMJD4Q9H9V9 463 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 RBM27Q9P2N5 1060 aaKnown RBP22.64■■□□□ 1.21
PUF60-219ENST00000532127 RBM19Q9Y4C8 960 aaKnown RBP22.64■■□□□ 1.21
PUF60-219ENST00000532127 A0A0G2JMZ2 1700 aa22.64■■□□□ 1.21
PUF60-219ENST00000532127 ALDH1A1P00352 501 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 HERVK_113P62684 666 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 TRIM22Q8IYM9 498 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 CCDC82Q8N4S0 544 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 MB21D1Q8N884 522 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 NSUN7Q8NE18 718 aaKnown RBP22.63■■□□□ 1.21
PUF60-219ENST00000532127 SMCR8Q8TEV9 937 aaPredicted RBP22.63■■□□□ 1.21
PUF60-219ENST00000532127 MTMR8Q96EF0 704 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 RRP36Q96EU6 259 aaKnown RBP22.63■■□□□ 1.21
PUF60-219ENST00000532127 P2RX7Q99572 595 aaKnown RBP22.63■■□□□ 1.21
PUF60-219ENST00000532127 RNF26Q9BY78 433 aaPredicted RBP22.63■■□□□ 1.21
PUF60-219ENST00000532127 RANBP17Q9H2T7 1088 aaKnown RBP22.63■■□□□ 1.21
PUF60-219ENST00000532127 ADAMTS5Q9UNA0 930 aa22.63■■□□□ 1.21
PUF60-219ENST00000532127 STK36Q9NRP7 1315 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 VWA5AO00534 786 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 ZBED4O75132 1171 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 CTDNEP1O95476 244 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 AKAP17AQ02040 695 aaKnown RBP22.62■■□□□ 1.21
PUF60-219ENST00000532127 PHKBQ93100 1093 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 SLC38A10Q9HBR0 1119 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 VAT1LQ9HCJ6 419 aa22.62■■□□□ 1.21
PUF60-219ENST00000532127 SEC63Q9UGP8 760 aaKnown RBP22.62■■□□□ 1.21
PUF60-219ENST00000532127 CTDP1Q9Y5B0 961 aaPredicted RBP22.62■■□□□ 1.21
PUF60-219ENST00000532127 BAZ2BQ9UIF8 2168 aaKnown RBP22.62■■□□□ 1.21
PUF60-219ENST00000532127 FMNL1O95466 1100 aaPredicted RBP22.61■■□□□ 1.21
PUF60-219ENST00000532127 CYP2C8P10632 490 aa22.61■■□□□ 1.21
PUF60-219ENST00000532127 GCLCP48506 637 aaPredicted RBP22.61■■□□□ 1.21
PUF60-219ENST00000532127 SSRP1Q08945 709 aaKnown RBP22.61■■□□□ 1.21
PUF60-219ENST00000532127 TAF1CQ15572 869 aaPredicted RBP22.61■■□□□ 1.21
PUF60-219ENST00000532127 CDC37Q16543 378 aaPredicted RBP22.61■■□□□ 1.21
PUF60-219ENST00000532127 SLC26A6Q9BXS9 759 aa22.61■■□□□ 1.21
PUF60-219ENST00000532127 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.61■■□□□ 1.21
PUF60-219ENST00000532127 PTPDC1A2A3K4 754 aa22.6■■□□□ 1.21
PUF60-219ENST00000532127 ZBTB5O15062 677 aa22.6■■□□□ 1.21
PUF60-219ENST00000532127 PRPF3O43395 683 aaKnown RBP22.6■■□□□ 1.21
PUF60-219ENST00000532127 HMGN5P82970 282 aaKnown RBP22.6■■□□□ 1.21
PUF60-219ENST00000532127 HOMER1Q86YM7 354 aa22.6■■□□□ 1.21
PUF60-219ENST00000532127 INTS4Q96HW7 963 aaKnown RBP22.6■■□□□ 1.21
PUF60-219ENST00000532127 PIGSQ96S52 555 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms