RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 SNRNP48Q6IEG0 339 aaKnown RBP25.16■■□□□ 1.62
FDFT1-220ENST00000531733 KBTBD3Q8NAB2 608 aa25.16■■□□□ 1.62
FDFT1-220ENST00000531733 NYAP2Q9P242 653 aa25.16■■□□□ 1.62
FDFT1-220ENST00000531733 M0R2C6 588 aa25.15■■□□□ 1.62
FDFT1-220ENST00000531733 PRDM1O75626 825 aa25.15■■□□□ 1.62
FDFT1-220ENST00000531733 SNAI1O95863 264 aaPredicted RBP25.15■■□□□ 1.62
FDFT1-220ENST00000531733 RNF180Q86T96 592 aa25.15■■□□□ 1.62
FDFT1-220ENST00000531733 CHMP4BQ9H444 224 aaKnown RBP25.15■■□□□ 1.62
FDFT1-220ENST00000531733 MKNK2Q9HBH9 465 aa25.15■■□□□ 1.62
FDFT1-220ENST00000531733 MYH4Q9Y623 1939 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 VCANP13611 3396 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 AKR1A1P14550 325 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 SLC4A3P48751 1232 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 APPBP2Q92624 585 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 CDX2Q99626 313 aaPredicted RBP25.14■■□□□ 1.62
FDFT1-220ENST00000531733 TEX13BQ9BXU2 312 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 TTYH1Q9H313 450 aaPredicted RBP25.14■■□□□ 1.62
FDFT1-220ENST00000531733 SEMA6BQ9H3T3 888 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 CLIP2Q9UDT6 1046 aa25.14■■□□□ 1.62
FDFT1-220ENST00000531733 DNAJC25-GNG10A0A024R161 153 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 MYADML2A6NDP7 307 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 RNF113AO15541 343 aaKnown RBP25.13■■□□□ 1.61
FDFT1-220ENST00000531733 GPAA1O43292 621 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 PQBP1O60828 265 aaKnown RBP25.13■■□□□ 1.61
FDFT1-220ENST00000531733 CLTBP09497 229 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 COPB2P35606 906 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 GIMAP6Q6P9H5 292 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.13■■□□□ 1.61
FDFT1-220ENST00000531733 CPXCR1Q8N123 301 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 FGD4Q96M96 766 aa25.13■■□□□ 1.61
FDFT1-220ENST00000531733 COL25A1Q9BXS0 654 aaPredicted RBP25.13■■□□□ 1.61
FDFT1-220ENST00000531733 SYNRGQ9UMZ2 1314 aa25.12■■□□□ 1.61
FDFT1-220ENST00000531733 ADCY6O43306 1168 aa25.12■■□□□ 1.61
FDFT1-220ENST00000531733 RAVER2Q9HCJ3 691 aaKnown RBP25.12■■□□□ 1.61
FDFT1-220ENST00000531733 CNPY2Q9Y2B0 182 aa25.12■■□□□ 1.61
FDFT1-220ENST00000531733 TACC3Q9Y6A5 838 aa25.12■■□□□ 1.61
FDFT1-220ENST00000531733 ACLYP53396 1101 aa25.11■■□□□ 1.61
FDFT1-220ENST00000531733 CCSAPQ6IQ19 270 aaPredicted RBP25.11■■□□□ 1.61
FDFT1-220ENST00000531733 PRPF38AQ8NAV1 312 aaKnown RBP25.11■■□□□ 1.61
FDFT1-220ENST00000531733 KLHDC9Q8NEP7 349 aa25.11■■□□□ 1.61
FDFT1-220ENST00000531733 KIFC2Q96AC6 838 aa25.11■■□□□ 1.61
FDFT1-220ENST00000531733 CEP95Q96GE4 821 aa25.11■■□□□ 1.61
FDFT1-220ENST00000531733 DCTPP1Q9H773 170 aa25.11■■□□□ 1.61
FDFT1-220ENST00000531733 ZHX1Q9UKY1 873 aaPredicted RBP25.11■■□□□ 1.61
FDFT1-220ENST00000531733 MCM3APO60318 1980 aa25.11■■□□□ 1.61
FDFT1-220ENST00000531733 KIAA0355O15063 1070 aa25.1■■□□□ 1.61
FDFT1-220ENST00000531733 FAAP100Q0VG06 881 aa25.1■■□□□ 1.61
FDFT1-220ENST00000531733 MAMDC4Q6UXC1 1216 aa25.1■■□□□ 1.61
FDFT1-220ENST00000531733 LRRC47Q8N1G4 583 aaKnown RBP25.1■■□□□ 1.61
FDFT1-220ENST00000531733 DDX11Q96FC9 970 aa25.1■■□□□ 1.61
FDFT1-220ENST00000531733 SEC62Q99442 399 aaKnown RBP25.1■■□□□ 1.61
FDFT1-220ENST00000531733 SYNGAP1Q96PV0 1343 aa25.1■■□□□ 1.61
FDFT1-220ENST00000531733 ATP2A1O14983 1001 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 TDO2P48775 406 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 SMAD3P84022 425 aaKnown RBP25.09■■□□□ 1.61
FDFT1-220ENST00000531733 KCNA10Q16322 511 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 MYLIPQ8WY64 445 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 MKL1Q969V6 931 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 SLC38A10Q9HBR0 1119 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 MTMR4Q9NYA4 1195 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 FAM184BQ9ULE4 1060 aa25.09■■□□□ 1.61
FDFT1-220ENST00000531733 SPTBN5Q9NRC6 3674 aaKnown RBP25.08■■□□□ 1.61
FDFT1-220ENST00000531733 MSL3Q8N5Y2 521 aaKnown RBP25.08■■□□□ 1.61
FDFT1-220ENST00000531733 TSEN34Q9BSV6 310 aaKnown RBP25.08■■□□□ 1.61
FDFT1-220ENST00000531733 TMEM39AQ9NV64 488 aa25.08■■□□□ 1.61
FDFT1-220ENST00000531733 ZBED4O75132 1171 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 APPP05067 770 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 RAG1P15918 1043 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 ANKRD33Q7Z3H0 272 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 IFNL3Q8IZI9 196 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 OTUD7AQ8TE49 926 aaPredicted RBP25.07■■□□□ 1.6
FDFT1-220ENST00000531733 CHMP4CQ96CF2 233 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 RNPC3Q96LT9 517 aaKnown RBP25.07■■□□□ 1.6
FDFT1-220ENST00000531733 STARD7Q9NQZ5 370 aa25.07■■□□□ 1.6
FDFT1-220ENST00000531733 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.07■■□□□ 1.6
FDFT1-220ENST00000531733 PATL2C9JE40 543 aaKnown RBP25.06■■□□□ 1.6
FDFT1-220ENST00000531733 ACVR2BQ13705 512 aa25.06■■□□□ 1.6
FDFT1-220ENST00000531733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.06■■□□□ 1.6
FDFT1-220ENST00000531733 ZNF444Q8N0Y2 327 aaPredicted RBP25.06■■□□□ 1.6
FDFT1-220ENST00000531733 FEM1BQ9UK73 627 aa25.06■■□□□ 1.6
FDFT1-220ENST00000531733 DUSP11O75319 330 aaKnown RBP25.05■■□□□ 1.6
FDFT1-220ENST00000531733 ZFYP08048 801 aaPredicted RBP25.05■■□□□ 1.6
FDFT1-220ENST00000531733 ZNF467Q7Z7K2 595 aaPredicted RBP25.05■■□□□ 1.6
FDFT1-220ENST00000531733 GMCL1P1Q8NEA9 526 aa25.05■■□□□ 1.6
FDFT1-220ENST00000531733 MAFAQ8NHW3 353 aaPredicted RBP25.05■■□□□ 1.6
FDFT1-220ENST00000531733 GPATCH3Q96I76 525 aa25.05■■□□□ 1.6
FDFT1-220ENST00000531733 TOX2Q96NM4 488 aa25.05■■□□□ 1.6
FDFT1-220ENST00000531733 HOMER2Q9NSB8 354 aa25.05■■□□□ 1.6
FDFT1-220ENST00000531733 MOXD2PA6NHM9 499 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 TTLL1O95922 423 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 GNAT2P19087 354 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 CNTN2Q02246 1040 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 FPGSQ05932 587 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 CCDC144BQ3MJ40 725 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 SLFN13Q68D06 897 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 ARMCX2Q7L311 632 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 ANKRD35Q8N283 1001 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 NEDD1Q8NHV4 660 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 PI4K2BQ8TCG2 481 aa25.04■■□□□ 1.6
FDFT1-220ENST00000531733 KATNBL1Q9H079 304 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms