RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SNW1Q13573 536 aaKnown RBP6.85□□□□□ -1.31
USP47-211ENST00000531513 PWP1Q13610 501 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 ZPBP2Q6X784 338 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 FAM196AQ6ZSG2 479 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 ZNF655Q8N720 491 aaPredicted RBP6.85□□□□□ -1.31
USP47-211ENST00000531513 PLCD4Q9BRC7 762 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 MRS2Q9HD23 443 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 SIRT5Q9NXA8 310 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 VTI1BQ9UEU0 232 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 SLC22A31A6NKX4 558 aa6.84□□□□□ -1.31
USP47-211ENST00000531513 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
USP47-211ENST00000531513 SYPP08247 313 aa6.84□□□□□ -1.31
USP47-211ENST00000531513 RAG1P15918 1043 aa6.84□□□□□ -1.31
USP47-211ENST00000531513 POLR2BP30876 1174 aaKnown RBP6.84□□□□□ -1.31
USP47-211ENST00000531513 NFIXQ14938 502 aa6.84□□□□□ -1.31
USP47-211ENST00000531513 CNTD2Q9H8S5 307 aa6.84□□□□□ -1.31
USP47-211ENST00000531513 SSU72P8A0A1W2PR75 194 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 PRAMEF1O95521 474 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 AFF3P51826 1226 aaKnown RBP6.83□□□□□ -1.32
USP47-211ENST00000531513 ZC3H6P61129 1189 aaKnown RBP6.83□□□□□ -1.32
USP47-211ENST00000531513 MLECQ14165 292 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 MRPL58Q14197 206 aaKnown RBP6.83□□□□□ -1.32
USP47-211ENST00000531513 NBPF9Q3BBW0 867 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 NBPF12Q5TAG4 269 aaPredicted RBP6.83□□□□□ -1.32
USP47-211ENST00000531513 LINC00116Q8NCU8 138 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 DACT3Q96B18 629 aaPredicted RBP6.83□□□□□ -1.32
USP47-211ENST00000531513 DRC1Q96MC2 740 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 BACH2Q9BYV9 841 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 EPB41L4AQ9HCS5 686 aaPredicted RBP6.83□□□□□ -1.32
USP47-211ENST00000531513 RTEL1Q9NZ71 1219 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 GMIPQ9P107 970 aa6.83□□□□□ -1.32
USP47-211ENST00000531513 N4BP3O15049 544 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 PNLIPP16233 465 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 SYN1P17600 705 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 ITGAEP38570 1179 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 YBX1P67809 324 aaKnown RBP6.82□□□□□ -1.32
USP47-211ENST00000531513 CWF19L2Q2TBE0 894 aaKnown RBP6.82□□□□□ -1.32
USP47-211ENST00000531513 OVOS1Q6IE37 1185 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 ERMP1Q7Z2K6 904 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 SREK1Q8WXA9 508 aaKnown RBP6.82□□□□□ -1.32
USP47-211ENST00000531513 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP47-211ENST00000531513 XYLT2Q9H1B5 865 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 BRMS1Q9HCU9 246 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 KBTBD4Q9NVX7 518 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 PCDHB14Q9Y5E9 798 aa6.82□□□□□ -1.32
USP47-211ENST00000531513 IRS4O14654 1257 aaPredicted RBP6.81□□□□□ -1.32
USP47-211ENST00000531513 CDR1P51861 262 aa6.81□□□□□ -1.32
USP47-211ENST00000531513 RTP1P59025 263 aa6.81□□□□□ -1.32
USP47-211ENST00000531513 ERVFRD-1P60508 538 aa6.81□□□□□ -1.32
USP47-211ENST00000531513 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
USP47-211ENST00000531513 ZNF512BQ96KM6 892 aaPredicted RBP6.81□□□□□ -1.32
USP47-211ENST00000531513 FCRL2Q96LA5 508 aaPredicted RBP6.81□□□□□ -1.32
USP47-211ENST00000531513 LRRC3Q9BY71 257 aa6.81□□□□□ -1.32
USP47-211ENST00000531513 MINPP1Q9UNW1 487 aa6.81□□□□□ -1.32
USP47-211ENST00000531513 GPR55Q9Y2T6 319 aaPredicted RBP6.81□□□□□ -1.32
USP47-211ENST00000531513 SCAMP3O14828 347 aaKnown RBP6.8□□□□□ -1.32
USP47-211ENST00000531513 SIGLEC6O43699 453 aa6.8□□□□□ -1.32
USP47-211ENST00000531513 FBXL19Q6PCT2 694 aa6.8□□□□□ -1.32
USP47-211ENST00000531513 PRDM14Q9GZV8 571 aa6.8□□□□□ -1.32
USP47-211ENST00000531513 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
USP47-211ENST00000531513 KCNQ5Q9NR82 932 aa6.8□□□□□ -1.32
USP47-211ENST00000531513 TAF6LQ9Y6J9 622 aa6.8□□□□□ -1.32
USP47-211ENST00000531513 OTOL1A6NHN0 477 aaPredicted RBP6.79□□□□□ -1.32
USP47-211ENST00000531513 FADS2P1A8MWK0 482 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 SASH1O94885 1247 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 ATE1O95260 518 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 VMACQ2NL98 169 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 HSF5Q4G112 596 aaPredicted RBP6.79□□□□□ -1.32
USP47-211ENST00000531513 NAALADL2Q58DX5 795 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 OLFML2BQ68BL8 750 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 TMEFF1Q8IYR6 380 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 FEZF2Q8TBJ5 459 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
USP47-211ENST00000531513 ABLIM1O14639 778 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 ERCC5P28715 1186 aaPredicted RBP6.78□□□□□ -1.32
USP47-211ENST00000531513 CRKP46108 304 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 HDLBPQ00341 1268 aaKnown RBP6.78□□□□□ -1.32
USP47-211ENST00000531513 RAD51AP2Q09MP3 1159 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 LDLRAD1Q5T700 205 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 CDCP2Q5VXM1 449 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 GALNT18Q6P9A2 607 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 CXorf38Q8TB03 319 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 ATG4CQ96DT6 458 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 CNNM2Q9H8M5 875 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 CHST7Q9NS84 486 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 ERVK13-1Q9NX77 482 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 KLHL14Q9P2G3 628 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 TNFRSF10DQ9UBN6 386 aa6.78□□□□□ -1.32
USP47-211ENST00000531513 SUPT16HQ9Y5B9 1047 aaKnown RBP6.78□□□□□ -1.32
USP47-211ENST00000531513 MEIS1O00470 390 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 GREM1O60565 184 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 CLEC3AO75596 197 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 CEBPAP49715 358 aaPredicted RBP6.77□□□□□ -1.33
USP47-211ENST00000531513 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 TMC6Q7Z403 805 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 SLCO6A1Q86UG4 719 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 IGDCC3Q8IVU1 814 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 ROBO2Q9HCK4 1378 aa6.77□□□□□ -1.33
USP47-211ENST00000531513 WTIPA6NIX2 430 aaPredicted RBP6.76□□□□□ -1.33
USP47-211ENST00000531513 MPOP05164 745 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms