RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.04
TM9SF1-211ENST00000531406 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.04
TM9SF1-211ENST00000531406 PRDM5Q9NQX1 630 aaPredicted RBP15.27■□□□□ 0.04
TM9SF1-211ENST00000531406 SYNPO2Q9UMS6 1093 aa15.27■□□□□ 0.04
TM9SF1-211ENST00000531406 CNPY2Q9Y2B0 182 aa15.27■□□□□ 0.04
TM9SF1-211ENST00000531406 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.04
TM9SF1-211ENST00000531406 DNAJC25-GNG10A0A024R161 153 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 TTLL1O95922 423 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 AKR1A1P14550 325 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 SLC4A3P48751 1232 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 FAM109BQ6ICB4 259 aaPredicted RBP15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 CPXCR1Q8N123 301 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 MSL3Q8N5Y2 521 aaKnown RBP15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 PDLIM7Q9NR12 457 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 FEM1BQ9UK73 627 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 CTDP1Q9Y5B0 961 aaPredicted RBP15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 FRMPD3Q5JV73 1810 aa15.26■□□□□ 0.03
TM9SF1-211ENST00000531406 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 TRIM43BA6NCK2 446 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 SNAI1O95863 264 aaPredicted RBP15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 PDE4BQ07343 736 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 ZMYM1Q5SVZ6 1142 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 SH3RF1Q7Z6J0 888 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 LRRC47Q8N1G4 583 aaKnown RBP15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 BADQ92934 168 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 TRIM43Q96BQ3 446 aaPredicted RBP15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 LENG1Q96BZ8 264 aaPredicted RBP15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 FSD1Q9BTV5 496 aa15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 RAVER2Q9HCJ3 691 aaKnown RBP15.25■□□□□ 0.03
TM9SF1-211ENST00000531406 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 ADAMTS4O75173 837 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 TFAP4Q01664 338 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 PPARAQ07869 468 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 SHHQ15465 462 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 C9orf50Q5SZB4 431 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 SLFN13Q68D06 897 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 ZNF467Q7Z7K2 595 aaPredicted RBP15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 NAPBQ9H115 298 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 FAM184BQ9ULE4 1060 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 PLIN4Q96Q06 1357 aa15.24■□□□□ 0.03
TM9SF1-211ENST00000531406 GREB1LQ9C091 1923 aaPredicted RBP15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 A0A1W2PQ45 241 aaPredicted RBP15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 A0A1W2PQY0 241 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 BMP3P12645 472 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 MX1P20591 662 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 OAZ1P54368 228 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 TSEN34Q9BSV6 310 aaKnown RBP15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 FBXO40Q9UH90 709 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 TACC3Q9Y6A5 838 aa15.23■□□□□ 0.03
TM9SF1-211ENST00000531406 PARP14Q460N5 1801 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 SYNRGQ9UMZ2 1314 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 MYH7P12883 1935 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 MYH8P13535 1937 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 TMEM232C9JQI7 657 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 DLL1O00548 723 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 FOXP2O15409 715 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 FDX1P10109 184 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 ACLYP53396 1101 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 ACVR2BQ13705 512 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 KLHDC9Q8NEP7 349 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 GMCL1Q96IK5 515 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 FGD4Q96M96 766 aa15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 ZHX1Q9UKY1 873 aaPredicted RBP15.22■□□□□ 0.03
TM9SF1-211ENST00000531406 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 COL6A3P12111 3177 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 KIAA0355O15063 1070 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 PQBP1O60828 265 aaKnown RBP15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 DUSP11O75319 330 aaKnown RBP15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 CLTBP09497 229 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 ITGB8P26012 769 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 KCNA10Q16322 511 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 CCSAPQ6IQ19 270 aaPredicted RBP15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 CCDC129Q6ZRS4 1044 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 GUCD1Q96NT3 240 aa15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 ISY1Q9ULR0 285 aaKnown RBP15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
TM9SF1-211ENST00000531406 MOXD2PA6NHM9 499 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 MCCP23508 829 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 PPP4R3BQ5MIZ7 849 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 ANKRD45Q5TZF3 282 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 ANKRD33Q7Z3H0 272 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 FAM160B2Q86V87 743 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 CHURC1Q8WUH1 139 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 STAG1Q8WVM7 1258 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 FAM161BQ96MY7 647 aa15.2■□□□□ 0.02
TM9SF1-211ENST00000531406 TOX2Q96NM4 488 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms