RNA–Protein interactions for RNA: ENST00000531146.1

VPS51-210, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 594 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-210ENST00000531146 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
VPS51-210ENST00000531146 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
VPS51-210ENST00000531146 CLIP2Q9UDT6 1046 aa14.3□□□□□ -0.12
VPS51-210ENST00000531146 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
VPS51-210ENST00000531146 RIPK3Q9Y572 518 aa14.3□□□□□ -0.12
VPS51-210ENST00000531146 MYH4Q9Y623 1939 aa14.3□□□□□ -0.12
VPS51-210ENST00000531146 PGK1P00558 417 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
VPS51-210ENST00000531146 ZNF865P0CJ78 1059 aaPredicted RBP14.29□□□□□ -0.12
VPS51-210ENST00000531146 TDO2P48775 406 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 SNRNP48Q6IEG0 339 aaKnown RBP14.29□□□□□ -0.12
VPS51-210ENST00000531146 SH3RF1Q7Z6J0 888 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 PI4K2BQ8TCG2 481 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 LNPKQ9C0E8 428 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 XPNPEP3Q9NQH7 507 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 PRDM5Q9NQX1 630 aaPredicted RBP14.29□□□□□ -0.12
VPS51-210ENST00000531146 PRKAG2Q9UGJ0 569 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 UNC80Q8N2C7 3258 aa14.29□□□□□ -0.12
VPS51-210ENST00000531146 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
VPS51-210ENST00000531146 APPP05067 770 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 RARBP10826 455 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 GNAT2P19087 354 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 COPB2P35606 906 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 IFNL3Q8IZI9 196 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 TRIM43Q96BQ3 446 aaPredicted RBP14.28□□□□□ -0.12
VPS51-210ENST00000531146 CEP95Q96GE4 821 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 PDLIM7Q9NR12 457 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 MTMR4Q9NYA4 1195 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 STXBP5LQ9Y2K9 1186 aa14.28□□□□□ -0.12
VPS51-210ENST00000531146 CDH23Q9H251 3354 aa14.27□□□□□ -0.12
VPS51-210ENST00000531146 TTC41PQ6P2S7 1318 aa14.27□□□□□ -0.12
VPS51-210ENST00000531146 DNAJC25-GNG10A0A024R161 153 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 EIF5BO60841 1220 aaKnown RBP14.27□□□□□ -0.13
VPS51-210ENST00000531146 SNAI1O95863 264 aaPredicted RBP14.27□□□□□ -0.13
VPS51-210ENST00000531146 SLC4A3P48751 1232 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 TLE2Q04725 743 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 SHHQ15465 462 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 C9orf50Q5SZB4 431 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 C1orf53Q5VUE5 145 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 ZNF444Q8N0Y2 327 aaPredicted RBP14.27□□□□□ -0.13
VPS51-210ENST00000531146 CPXCR1Q8N123 301 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 LRRC47Q8N1G4 583 aaKnown RBP14.27□□□□□ -0.13
VPS51-210ENST00000531146 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.13
VPS51-210ENST00000531146 BADQ92934 168 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 MKL1Q969V6 931 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 RAVER2Q9HCJ3 691 aaKnown RBP14.27□□□□□ -0.13
VPS51-210ENST00000531146 MCM3APO60318 1980 aa14.27□□□□□ -0.13
VPS51-210ENST00000531146 ATP2A1O14983 1001 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 ADAMTS4O75173 837 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 AKR1A1P14550 325 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 ITGB8P26012 769 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 RNF180Q86T96 592 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 KIFC2Q96AC6 838 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 GUCD1Q96NT3 240 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 CNPY2Q9Y2B0 182 aa14.26□□□□□ -0.13
VPS51-210ENST00000531146 PLIN4Q96Q06 1357 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 A0A1W2PQ45 241 aaPredicted RBP14.25□□□□□ -0.13
VPS51-210ENST00000531146 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 DLL1O00548 723 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 FOXP2O15409 715 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 ZBED4O75132 1171 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 TTLL1O95922 423 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 MAMDC4Q6UXC1 1216 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 GMCL1P1Q8NEA9 526 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 NEDD1Q8NHV4 660 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 DDX11Q96FC9 970 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 FGD4Q96M96 766 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 FSD1Q9BTV5 496 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 ZNF287Q9HBT7 754 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 EYSQ5T1H1 3165 aa14.25□□□□□ -0.13
VPS51-210ENST00000531146 SYNGAP1Q96PV0 1343 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 SYNRGQ9UMZ2 1314 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 MYADML2A6NDP7 307 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 ERC2O15083 957 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 ADCY6O43306 1168 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 PDE4AP27815 886 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 IRX5P78411 483 aaPredicted RBP14.24□□□□□ -0.13
VPS51-210ENST00000531146 TFAP4Q01664 338 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 PPARAQ07869 468 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 FAM109BQ6ICB4 259 aaPredicted RBP14.24□□□□□ -0.13
VPS51-210ENST00000531146 CCDC129Q6ZRS4 1044 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.24□□□□□ -0.13
VPS51-210ENST00000531146 MSL3Q8N5Y2 521 aaKnown RBP14.24□□□□□ -0.13
VPS51-210ENST00000531146 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 FAM161BQ96MY7 647 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 NACAP1Q9BZK3 213 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 INCENPQ9NQS7 918 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
VPS51-210ENST00000531146 SALL3Q9BXA9 1300 aa14.23□□□□□ -0.13
VPS51-210ENST00000531146 PQBP1O60828 265 aaKnown RBP14.23□□□□□ -0.13
VPS51-210ENST00000531146 CLTBP09497 229 aa14.23□□□□□ -0.13
VPS51-210ENST00000531146 TSPY3P0CV98 308 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms