RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
CPSF1-205ENST00000531042 UBE2OQ9C0C9 1292 aaKnown RBP18.78■□□□□ 0.6
CPSF1-205ENST00000531042 RIPK3Q9Y572 518 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 SMCHD1A6NHR9 2005 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 ZBED4O75132 1171 aa18.77■□□□□ 0.6
CPSF1-205ENST00000531042 TFAP4Q01664 338 aa18.77■□□□□ 0.6
CPSF1-205ENST00000531042 KIFC2Q96AC6 838 aa18.77■□□□□ 0.6
CPSF1-205ENST00000531042 EVI5LQ96CN4 794 aa18.77■□□□□ 0.6
CPSF1-205ENST00000531042 FEM1BQ9UK73 627 aa18.77■□□□□ 0.6
CPSF1-205ENST00000531042 TAL1P17542 331 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-205ENST00000531042 PDE1AP54750 535 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 RTP1P59025 263 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 MDM2Q00987 491 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-205ENST00000531042 LRRC41Q15345 812 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 LRIT3Q3SXY7 679 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 SLFN13Q68D06 897 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 SLC39A5Q6ZMH5 540 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 CPXCR1Q8N123 301 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 SLC38A10Q9HBR0 1119 aa18.76■□□□□ 0.59
CPSF1-205ENST00000531042 CTDP1Q9Y5B0 961 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-205ENST00000531042 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-205ENST00000531042 BMP3P12645 472 aa18.75■□□□□ 0.59
CPSF1-205ENST00000531042 SLC4A3P48751 1232 aa18.75■□□□□ 0.59
CPSF1-205ENST00000531042 DDX11Q96FC9 970 aa18.75■□□□□ 0.59
CPSF1-205ENST00000531042 RAVER2Q9HCJ3 691 aaKnown RBP18.75■□□□□ 0.59
CPSF1-205ENST00000531042 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPSF1-205ENST00000531042 DNAJC25-GNG10A0A024R161 153 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
CPSF1-205ENST00000531042 RARBP10826 455 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 ADCYAP1R1P41586 468 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 OAZ1P54368 228 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 CTDSPL2Q05D32 466 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.74■□□□□ 0.59
CPSF1-205ENST00000531042 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
CPSF1-205ENST00000531042 XPNPEP3Q9NQH7 507 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 INCENPQ9NQS7 918 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 HELLSQ9NRZ9 838 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 ATP11BQ9Y2G3 1177 aa18.74■□□□□ 0.59
CPSF1-205ENST00000531042 TMEM232C9JQI7 657 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 AKR1A1P14550 325 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 SNX17Q15036 470 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 GPR153Q6NV75 609 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 MAMDC4Q6UXC1 1216 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 FERMT2Q96AC1 680 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 GMCL1Q96IK5 515 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
CPSF1-205ENST00000531042 ANAPC4Q9UJX5 808 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 CNPY2Q9Y2B0 182 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 SYNGAP1Q96PV0 1343 aa18.73■□□□□ 0.59
CPSF1-205ENST00000531042 TSPY2A6NKD2 308 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 SNAI1O95863 264 aaPredicted RBP18.72■□□□□ 0.59
CPSF1-205ENST00000531042 PGK1P00558 417 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 FDX1P10109 184 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 STAT2P52630 851 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 AAMPQ13685 434 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 ALX1Q15699 326 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 CHST13Q8NET6 341 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 IL17RBQ9NRM6 502 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 PRKAG2Q9UGJ0 569 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 FBXO40Q9UH90 709 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 STX8Q9UNK0 236 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 PHF24Q9UPV7 400 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 LTBP2Q14767 1821 aa18.72■□□□□ 0.59
CPSF1-205ENST00000531042 TRIM60Q495X7 471 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 ZNF467Q7Z7K2 595 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-205ENST00000531042 RNF180Q86T96 592 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 FAM160B2Q86V87 743 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 TICAM2Q86XR7 235 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 ANKRD35Q8N283 1001 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 CHURC1Q8WUH1 139 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 STAG1Q8WVM7 1258 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 FAM227BQ96M60 508 aa18.71■□□□□ 0.59
CPSF1-205ENST00000531042 NMT2O60551 498 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 PLA2G6O60733 806 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 FGRP09769 529 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 MCCP23508 829 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 SLC1A4P43007 532 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 MCMDC2Q4G0Z9 681 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 LENG1Q96BZ8 264 aaPredicted RBP18.7■□□□□ 0.58
CPSF1-205ENST00000531042 YTHDC1Q96MU7 727 aaKnown RBP18.7■□□□□ 0.58
CPSF1-205ENST00000531042 LNPKQ9C0E8 428 aa18.7■□□□□ 0.58
CPSF1-205ENST00000531042 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
CPSF1-205ENST00000531042 LAMA2P24043 3122 aaKnown RBP18.69■□□□□ 0.58
CPSF1-205ENST00000531042 A0A0D9SFI3 127 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 ORC4O43929 436 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 RANBP6O60518 1105 aaKnown RBP18.69■□□□□ 0.58
CPSF1-205ENST00000531042 ADAMTS4O75173 837 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 NOVP48745 357 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 RCSD1Q6JBY9 416 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 CHMP4CQ96CF2 233 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 FGD4Q96M96 766 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 FAM184BQ9ULE4 1060 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 ZNF536O15090 1300 aa18.69■□□□□ 0.58
CPSF1-205ENST00000531042 COL6A3P12111 3177 aa18.68■□□□□ 0.58
CPSF1-205ENST00000531042 FGAP02671 866 aa18.68■□□□□ 0.58
CPSF1-205ENST00000531042 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms