RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 IQCA1Q86XH1 822 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 KRI1Q8N9T8 703 aaKnown RBP21.61■■□□□ 1.05
LTBP3-217ENST00000530785 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 PLEKHA4Q9H4M7 779 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 VIPAS39Q9H9C1 493 aa21.61■■□□□ 1.05
LTBP3-217ENST00000530785 DCP1AQ9NPI6 582 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-217ENST00000530785 PRPF6O94906 941 aaKnown RBP21.6■■□□□ 1.05
LTBP3-217ENST00000530785 PCP11498 1178 aaKnown RBP21.6■■□□□ 1.05
LTBP3-217ENST00000530785 PPP2R5BQ15173 497 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 CRNKL1Q9BZJ0 848 aaKnown RBP21.6■■□□□ 1.05
LTBP3-217ENST00000530785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.6■■□□□ 1.05
LTBP3-217ENST00000530785 KIAA1551Q9HCM1 1747 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 FUT2Q10981 343 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 MTF1Q14872 753 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 RILPL1Q5EBL4 403 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 CATIPQ7Z7H3 387 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 MICALL1Q8N3F8 863 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 AFAP1L1Q8TED9 768 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 CEP83Q9Y592 693 aa21.6■■□□□ 1.05
LTBP3-217ENST00000530785 KIF5CO60282 957 aa21.59■■□□□ 1.05
LTBP3-217ENST00000530785 RNF40O75150 1001 aa21.59■■□□□ 1.05
LTBP3-217ENST00000530785 PLEKHA8P1O95397 391 aa21.59■■□□□ 1.05
LTBP3-217ENST00000530785 PNOCQ13519 176 aa21.59■■□□□ 1.05
LTBP3-217ENST00000530785 ADGRG1Q9Y653 693 aa21.59■■□□□ 1.05
LTBP3-217ENST00000530785 RHOXF2BP0C7M4 288 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 RFC4P35249 363 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 TROAPQ12815 778 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 PKN1Q16512 942 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 SPECC1Q5M775 1068 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 RHOXF2Q9BQY4 288 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 KCNH3Q9ULD8 1083 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 PCDHB6Q9Y5E3 794 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 SYF2O95926 243 aaKnown RBP21.58■■□□□ 1.05
LTBP3-217ENST00000530785 ZNF18P17022 549 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 GRIN1Q05586 938 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 WDR93Q6P2C0 686 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 KAT2BQ92831 832 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 PANX2Q96RD6 677 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 LZTFL1Q9NQ48 299 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 VPS54Q9P1Q0 977 aa21.58■■□□□ 1.05
LTBP3-217ENST00000530785 FBXO2Q9UK22 296 aaPredicted RBP21.58■■□□□ 1.05
LTBP3-217ENST00000530785 hCG_1642624A0A1W2PR95 340 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 CYP2D6P10635 497 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 AKAP17AQ02040 695 aaKnown RBP21.57■■□□□ 1.04
LTBP3-217ENST00000530785 LONRF3Q496Y0 759 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 METTL16Q86W50 562 aaKnown RBP21.57■■□□□ 1.04
LTBP3-217ENST00000530785 CNPY4Q8N129 248 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 ATP8A2Q9NTI2 1148 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 DONSONQ9NYP3 566 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 ORC4O43929 436 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 PDE4BQ07343 736 aa21.57■■□□□ 1.04
LTBP3-217ENST00000530785 CTCFLQ8NI51 663 aaPredicted RBP21.57■■□□□ 1.04
LTBP3-217ENST00000530785 NMT2O60551 498 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 SHOX2O60902 331 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-217ENST00000530785 ERLIN2O94905 339 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 NFIXQ14938 502 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 WHAMMP3Q1A5X7 153 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 TRAPPC3LQ5T215 181 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 KCNG1Q9UIX4 513 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 SOWAHDA6NJG2 315 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 PTPREP23469 700 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 DZIP1Q86YF9 867 aaKnown RBP21.56■■□□□ 1.04
LTBP3-217ENST00000530785 RBM28Q9NW13 759 aaKnown RBP21.56■■□□□ 1.04
LTBP3-217ENST00000530785 ANKIB1Q9P2G1 1089 aa21.56■■□□□ 1.04
LTBP3-217ENST00000530785 ARPP21Q9UBL0 812 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-217ENST00000530785 CTAGE15A4D2H0 777 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CTAGE9A4FU28 777 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 PRPF3O43395 683 aaKnown RBP21.55■■□□□ 1.04
LTBP3-217ENST00000530785 DDAH1O94760 285 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 PRR29P0C7W0 189 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CTAGE8P0CG41 777 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 BMP6P22004 513 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 KIF4BQ2VIQ3 1234 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 FAM47AQ5JRC9 791 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 RAD9BQ6WBX8 426 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CTAGE6Q86UF2 777 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CTAGE4Q8IX94 777 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CABP5Q9NP86 173 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 FAM205CA6NFA0 338 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CALM1P0DP23 149 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CALM2P0DP24 149 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 CALM3P0DP25 149 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 GRAPQ13588 217 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 ZNF569Q5MCW4 686 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 FOXP4Q8IVH2 680 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-217ENST00000530785 GRAPLQ8TC17 118 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-217ENST00000530785 PHF20Q9BVI0 1012 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 NAA15Q9BXJ9 866 aaKnown RBP21.55■■□□□ 1.04
LTBP3-217ENST00000530785 LRRC4BQ9NT99 713 aa21.55■■□□□ 1.04
LTBP3-217ENST00000530785 V9GY48 417 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-217ENST00000530785 XBP1P17861 261 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 MAP2K2P36507 400 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 CNBD1Q8NA66 436 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 ANKRD20A12PQ8NF67 263 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 A0A0U1RQJ8 604 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 AKR1B15C9JRZ8 316 aaPredicted RBP21.54■■□□□ 1.04
LTBP3-217ENST00000530785 SBK1Q52WX2 424 aa21.54■■□□□ 1.04
LTBP3-217ENST00000530785 ATRIPQ8WXE1 791 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms