RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	APP	P05067	770 aa		18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	TAL1	P17542	331 aa	Predicted RBP	18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	ZNF697	Q5TEC3	545 aa		18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	MAMDC4	Q6UXC1	1216 aa		18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	MKL1	Q969V6	931 aa		18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	DDX11	Q96FC9	970 aa		18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	TSEN34	Q9BSV6	310 aa	Known RBP	18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	TACC3	Q9Y6A5	838 aa		18.59	■□□□□ 0.57
TM9SF1-209	ENST00000530468	COL6A3	P12111	3177 aa		18.58	■□□□□ 0.57
TM9SF1-209	ENST00000530468	TTC41P	Q6P2S7	1318 aa		18.58	■□□□□ 0.57
TM9SF1-209	ENST00000530468	DNAJC25-GNG10	A0A024R161	153 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468		A0A1W2PQ45	241 aa	Predicted RBP	18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468		A0A1W2PQY0	241 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TRIM43B	A6NCK2	446 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PATL2	C9JE40	543 aa	Known RBP	18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TLE2	Q04725	743 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SHH	Q15465	462 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TSHZ3	Q63HK5	1081 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	NACAP1	Q9BZK3	213 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	MTMR4	Q9NYA4	1195 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	FEM1B	Q9UK73	627 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	FAM184B	Q9ULE4	1060 aa		18.58	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PLIN4	Q96Q06	1357 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PLXNA1	Q9UIW2	1896 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468		M0R2C6	588 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ERC2	O15083	957 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ADAMTS4	O75173	837 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TTLL1	O95922	423 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CLTB	P09497	229 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	OAZ1	P54368	228 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SH3RF1	Q7Z6J0	888 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	IFNL3	Q8IZI9	196 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	GMCL1P1	Q8NEA9	526 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CEP95	Q96GE4	821 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	GUCD1	Q96NT3	240 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SLC38A10	Q9HBR0	1119 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	FBXO40	Q9UH90	709 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	RIPK3	Q9Y572	518 aa		18.57	■□□□□ 0.56
TM9SF1-209	ENST00000530468	MOXD2P	A6NHM9	499 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PRDM1	O75626	825 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SLC3A2	P08195	630 aa	Known RBP	18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	FDX1	P10109	184 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PDE4B	Q07343	736 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	C9orf50	Q5SZB4	431 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CPXCR1	Q8N123	301 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CHST13	Q8NET6	341 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	NUP133	Q8WUM0	1156 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	KIFC2	Q96AC6	838 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	DNAH12	Q6ZR08	3092 aa		18.56	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SYNRG	Q9UMZ2	1314 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	KIAA0355	O15063	1070 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SNAI1	O95863	264 aa	Predicted RBP	18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TSPY3	P0CV98	308 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TSPY8	P0CW00	308 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SMAD3	P84022	425 aa	Known RBP	18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ANKRD35	Q8N283	1001 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	NEDD1	Q8NHV4	660 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	LENG1	Q96BZ8	264 aa	Predicted RBP	18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	RAVER2	Q9HCJ3	691 aa	Known RBP	18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	STARD7	Q9NQZ5	370 aa		18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.55	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PQBP1	O60828	265 aa	Known RBP	18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	DUSP11	O75319	330 aa	Known RBP	18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	RAG1	P15918	1043 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SLC4A3	P48751	1232 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ACLY	P53396	1101 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PPP4R3B	Q5MIZ7	849 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ANKRD33	Q7Z3H0	272 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	LRRC47	Q8N1G4	583 aa	Known RBP	18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	KLHDC9	Q8NEP7	349 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	FAM161B	Q96MY7	647 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TOX2	Q96NM4	488 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	NAPB	Q9H115	298 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ABHD16B	Q9H3Z7	469 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SMCHD1	A6NHR9	2005 aa		18.54	■□□□□ 0.56
TM9SF1-209	ENST00000530468	DCDC2C	A8MYV0	355 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	BMP3	P12645	472 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CST5	P28325	142 aa	Predicted RBP	18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ACVR2B	Q13705	512 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SLFN13	Q68D06	897 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PI4K2B	Q8TCG2	481 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	FSD1	Q9BTV5	496 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	TMEM39A	Q9NV64	488 aa		18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.53	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ITGB8	P26012	769 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	STAT2	P52630	851 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PPARA	Q07869	468 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	KCNA10	Q16322	511 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ZMYM1	Q5SVZ6	1142 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	PCSK9	Q8NBP7	692 aa	Known RBP	18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SEC62	Q99442	399 aa	Known RBP	18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	SPC25	Q9HBM1	224 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	MYH4	Q9Y623	1939 aa		18.52	■□□□□ 0.56
TM9SF1-209	ENST00000530468	ELP1	O95163	1332 aa		18.51	■□□□□ 0.55
TM9SF1-209	ENST00000530468	MROH7	Q68CQ1	1323 aa		18.51	■□□□□ 0.55
TM9SF1-209	ENST00000530468	TFAP4	Q01664	338 aa		18.51	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms