RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 RNF26Q9BY78 433 aaPredicted RBP9.47□□□□□ -0.89
CMTM1-214ENST00000530141 KAT14Q9H8E8 782 aa9.47□□□□□ -0.89
CMTM1-214ENST00000530141 DDX19AQ9NUU7 478 aaKnown RBP9.47□□□□□ -0.89
CMTM1-214ENST00000530141 TTF2Q9UNY4 1162 aaKnown RBP9.47□□□□□ -0.89
CMTM1-214ENST00000530141 MYO3BQ8WXR4 1341 aa9.47□□□□□ -0.89
CMTM1-214ENST00000530141 USP17L3A6NCW0 530 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 USP17L4A6NCW7 530 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 YEATS4O95619 227 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 HLA-DOAP06340 250 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 TSPY3P0CV98 308 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 TSPY8P0CW00 308 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 ADD1P35611 737 aaKnown RBP9.46□□□□□ -0.9
CMTM1-214ENST00000530141 RHBDL3P58872 404 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 NTRK3Q16288 839 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 LRSAM1Q6UWE0 723 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 C16orf86Q6ZW13 317 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 USP17L1Q7RTZ2 530 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.9
CMTM1-214ENST00000530141 SLC17A8Q8NDX2 589 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 LZTS2Q9BRK4 669 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 ZKSCAN3Q9BRR0 538 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 GRPEL1Q9HAV7 217 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 PTPN22Q9Y2R2 807 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 DAGLAQ9Y4D2 1042 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 FLT1P17948 1338 aa9.46□□□□□ -0.9
CMTM1-214ENST00000530141 PRPF3O43395 683 aaKnown RBP9.45□□□□□ -0.9
CMTM1-214ENST00000530141 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 CDC27P30260 824 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 MMP14P50281 582 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 FKBP1BP68106 108 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 TFAP4Q01664 338 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 SREBF2Q12772 1141 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 E2F4Q16254 413 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 KRT40Q6A162 431 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 STK11IPQ8N1F8 1099 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 CRACR2BQ8N4Y2 399 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-214ENST00000530141 BICD2Q8TD16 824 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 ZDHHC15Q96MV8 337 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 GMLQ99445 158 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 FAM217BQ9NTX9 383 aaPredicted RBP9.45□□□□□ -0.9
CMTM1-214ENST00000530141 RTEL1Q9NZ71 1219 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 RCOR1Q9UKL0 485 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
CMTM1-214ENST00000530141 CYP2D7A0A087X1C5 515 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 DPYSL4O14531 572 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 GADD45BO75293 160 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-214ENST00000530141 PRDM1O75626 825 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 CYP2D6P10635 497 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 GJA5P36382 358 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 CRHR2Q13324 411 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 STK38Q15208 465 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 SF3A1Q15459 793 aaKnown RBP9.44□□□□□ -0.9
CMTM1-214ENST00000530141 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 DHX36Q9H2U1 1008 aaKnown RBP9.44□□□□□ -0.9
CMTM1-214ENST00000530141 FOXP1Q9H334 677 aaPredicted RBP9.44□□□□□ -0.9
CMTM1-214ENST00000530141 TSPY26PQ9H489 355 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 USP40Q9NVE5 1235 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 TMEM63CQ9P1W3 806 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 SERPINA10Q9UK55 444 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 PTCH2Q9Y6C5 1203 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 PLIN4Q96Q06 1357 aa9.44□□□□□ -0.9
CMTM1-214ENST00000530141 COL6A3P12111 3177 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 NAV1Q8NEY1 1877 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 ECM29Q5VYK3 1845 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 SOX1O00570 391 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-214ENST00000530141 WNT10BO00744 389 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 CTAGE5O15320 804 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 BMP15O95972 392 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 MMP1P03956 469 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 RXRAP19793 462 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 U2AF2P26368 475 aaKnown RBP eCLIP9.43□□□□□ -0.9
CMTM1-214ENST00000530141 CRKP46108 304 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 NASPP49321 788 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-214ENST00000530141 CDK8P49336 464 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 FOSBP53539 338 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 GUCY1B3Q02153 619 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 TROAPQ12815 778 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 GRIK5Q16478 980 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 NOM1Q5C9Z4 860 aaKnown RBP9.43□□□□□ -0.9
CMTM1-214ENST00000530141 FAM47AQ5JRC9 791 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 CCDC73Q6ZRK6 1079 aa9.43□□□□□ -0.9
CMTM1-214ENST00000530141 TMTC3Q6ZXV5 915 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms