RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 MFSD5Q6N075 450 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TMED8Q6PL24 325 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-208ENST00000529994 NUP133Q8WUM0 1156 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 VTI1AQ96AJ9 217 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TSEN34Q9BSV6 310 aaKnown RBP13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TBX21Q9UL17 535 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
SF3B2-208ENST00000529994 ROBO3Q96MS0 1386 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
SF3B2-208ENST00000529994 SNAI1O95863 264 aaPredicted RBP13.64□□□□□ -0.23
SF3B2-208ENST00000529994 IGFBP4P22692 258 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 CDK8P49336 464 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.232e-9■■■□□ 15.5
SF3B2-208ENST00000529994 KLHDC9Q8NEP7 349 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 PPP1R12CQ9BZL4 782 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 THEGQ9P2T0 379 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 ZNF214Q9UL59 606 aaPredicted RBP13.64□□□□□ -0.23
SF3B2-208ENST00000529994 FAM184BQ9ULE4 1060 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
SF3B2-208ENST00000529994 BDP1A6H8Y1 2624 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 MOXD2PA6NHM9 499 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 MBD4O95243 580 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 C6orf222P0C671 652 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-208ENST00000529994 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 CCSAPQ6IQ19 270 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-208ENST00000529994 ZNF365Q70YC5 407 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 REPS2Q8NFH8 660 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 ATXN2LQ8WWM7 1075 aaKnown RBP13.63□□□□□ -0.23
SF3B2-208ENST00000529994 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 GLT1D1Q96MS3 346 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 ASB2Q96Q27 587 aa13.63□□□□□ -0.23
SF3B2-208ENST00000529994 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-208ENST00000529994 USP17L12C9JPN9 530 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 USP17L21D6R901 530 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 ADCY6O43306 1168 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 CHGBP05060 677 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 ASGR1P07306 291 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 SNRNP48Q6IEG0 339 aaKnown RBP13.62□□□□□ -0.23
SF3B2-208ENST00000529994 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 CCDC17Q96LX7 622 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 GOPCQ9HD26 462 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 DDX19BQ9UMR2 479 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 RIPK3Q9Y572 518 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 REV3LO60673 3130 aa13.62□□□□□ -0.23
SF3B2-208ENST00000529994 CHD7Q9P2D1 2997 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
SF3B2-208ENST00000529994 CYP2C18P33260 490 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 CDK7P50613 346 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 MRPS5P82675 430 aaKnown RBP13.61□□□□□ -0.23
SF3B2-208ENST00000529994 ACVR2BQ13705 512 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 AKNAD1Q5T1N1 836 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 C12orf60Q5U649 245 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 CCDC174Q6PII3 467 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 C16orf86Q6ZW13 317 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 UHRF1Q96T88 793 aaPredicted RBP13.61□□□□□ -0.23
SF3B2-208ENST00000529994 NKX2-4Q9H2Z4 354 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 CXXC1Q9P0U4 656 aaPredicted RBP13.61□□□□□ -0.23
SF3B2-208ENST00000529994 MSRAQ9UJ68 235 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 ELP1O95163 1332 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 MROH7Q68CQ1 1323 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 SYNGAP1Q96PV0 1343 aa13.61□□□□□ -0.23
SF3B2-208ENST00000529994 ARVCFO00192 962 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 COPB2P35606 906 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 ADD2P35612 726 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 GNASQ5JWF2 1037 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 PSRC1Q6PGN9 363 aaPredicted RBP13.6□□□□□ -0.23
SF3B2-208ENST00000529994 FAM126BQ8IXS8 530 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 AMOTL1Q8IY63 956 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
SF3B2-208ENST00000529994 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 NECAB3Q96P71 396 aaPredicted RBP13.6□□□□□ -0.23
SF3B2-208ENST00000529994 SLF1Q9BQI6 1058 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 TEX13BQ9BXU2 312 aa13.6□□□□□ -0.23
SF3B2-208ENST00000529994 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.6□□□□□ -0.23
SF3B2-208ENST00000529994 MYH7P12883 1935 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
SF3B2-208ENST00000529994 IFIT2P09913 472 aaKnown RBP13.59□□□□□ -0.23
SF3B2-208ENST00000529994 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
SF3B2-208ENST00000529994 BEX3Q00994 111 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 CCDC144BQ3MJ40 725 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 CLASRPQ8N2M8 674 aaKnown RBP13.59□□□□□ -0.23
SF3B2-208ENST00000529994 MICALL1Q8N3F8 863 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
SF3B2-208ENST00000529994 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.59□□□□□ -0.23
SF3B2-208ENST00000529994 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
SF3B2-208ENST00000529994 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms