RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 CLEC10AQ8IUN9 316 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 SDR42E1Q8WUS8 393 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 DDX11Q96FC9 970 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 CDK5RAP2Q96SN8 1893 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 TEX13BQ9BXU2 312 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 PPP1R12CQ9BZL4 782 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
COPB1-207ENST00000529866 ZNF214Q9UL59 606 aaPredicted RBP12.58□□□□□ -0.4
COPB1-207ENST00000529866 HCN4Q9Y3Q4 1203 aa12.58□□□□□ -0.4
COPB1-207ENST00000529866 MYH1P12882 1939 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 RAD21O60216 631 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 ASGR1P07306 291 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 ACRP10323 421 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 CYP2D6P10635 497 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 CDK7P50613 346 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 MAMDC4Q6UXC1 1216 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 C16orf59Q7L2K0 433 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 AACSQ86V21 672 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 TMEM57Q8N5G2 664 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 NKX2-4Q9H2Z4 354 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 IL23AQ9NPF7 189 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 FBXO28Q9NVF7 368 aa12.57□□□□□ -0.4
COPB1-207ENST00000529866 MYO9BQ13459 2157 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 SNAI1O95863 264 aaPredicted RBP12.56□□□□□ -0.4
COPB1-207ENST00000529866 EEF2P13639 858 aaKnown RBP12.56□□□□□ -0.4
COPB1-207ENST00000529866 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
COPB1-207ENST00000529866 EVX2Q03828 476 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 ACVR2BQ13705 512 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
COPB1-207ENST00000529866 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
COPB1-207ENST00000529866 SIAH1Q8IUQ4 282 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 MICALL1Q8N3F8 863 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 LCORLQ8N3X6 602 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 ABHD16BQ9H3Z7 469 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 ATP8A2Q9NTI2 1148 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 CTDP1Q9Y5B0 961 aaPredicted RBP12.56□□□□□ -0.4
COPB1-207ENST00000529866 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 ZNF532Q9HCE3 1301 aa12.56□□□□□ -0.4
COPB1-207ENST00000529866 FGBP02675 491 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 GJA9P57773 515 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 SKIV2LQ15477 1246 aaKnown RBP12.55□□□□□ -0.4
COPB1-207ENST00000529866 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 ZKSCAN2Q63HK3 967 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 PPP2R2DQ66LE6 453 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
COPB1-207ENST00000529866 REPS2Q8NFH8 660 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 UPF3AQ9H1J1 476 aaKnown RBP12.55□□□□□ -0.4
COPB1-207ENST00000529866 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
COPB1-207ENST00000529866 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
COPB1-207ENST00000529866 ARIH1Q9Y4X5 557 aaPredicted RBP12.55□□□□□ -0.4
COPB1-207ENST00000529866 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
COPB1-207ENST00000529866 CABYRO75952 493 aa12.54□□□□□ -0.4
COPB1-207ENST00000529866 CYP2C18P33260 490 aa12.54□□□□□ -0.4
COPB1-207ENST00000529866 CDK8P49336 464 aa12.54□□□□□ -0.4
COPB1-207ENST00000529866 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
COPB1-207ENST00000529866 C16orf86Q6ZW13 317 aa12.54□□□□□ -0.4
COPB1-207ENST00000529866 DNAJC2Q99543 621 aaKnown RBP12.54□□□□□ -0.4
COPB1-207ENST00000529866 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
COPB1-207ENST00000529866 FBXO40Q9UH90 709 aa12.54□□□□□ -0.4
COPB1-207ENST00000529866 YBX2Q9Y2T7 364 aaKnown RBP12.54□□□□□ -0.4
COPB1-207ENST00000529866 DNAJC25-GNG10A0A024R161 153 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 GOLIM4O00461 696 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 MBD4O95243 580 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 RLBP1P12271 317 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 BMP1P13497 986 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 HSP90AB4PQ58FF6 505 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
COPB1-207ENST00000529866 OTOP2Q7RTS6 562 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
COPB1-207ENST00000529866 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.53□□□□□ -0.4
COPB1-207ENST00000529866 NECAB3Q96P71 396 aaPredicted RBP12.53□□□□□ -0.4
COPB1-207ENST00000529866 ARMT1Q9H993 441 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
COPB1-207ENST00000529866 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 ZBBXA8MT70 800 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 ATP2A1O14983 1001 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 ERC2O15083 957 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 ZEB2O60315 1214 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 ZBED4O75132 1171 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 CD4P01730 458 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 SLC4A3P48751 1232 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 C12orf60Q5U649 245 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
COPB1-207ENST00000529866 ARMCX2Q7L311 632 aa12.52□□□□□ -0.41
COPB1-207ENST00000529866 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms