RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 ISY1Q9ULR0 285 aaKnown RBP15.86■□□□□ 0.13
SMCO4-205ENST00000529714 WDR33Q9C0J8 1336 aaKnown RBP15.86■□□□□ 0.13
SMCO4-205ENST00000529714 CPLX1O14810 134 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 FLOT1O75955 427 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 IFNAR1P17181 557 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 OSBPP22059 807 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 KIF23Q02241 960 aaPredicted RBP15.85■□□□□ 0.13
SMCO4-205ENST00000529714 FUT2Q10981 343 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 CUL4AQ13619 759 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 BECN1Q14457 450 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 COG2Q14746 738 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 NTRK3Q16288 839 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 SYDE2Q5VT97 1194 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 OTUD7BQ6GQQ9 843 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 TTBK2Q6IQ55 1244 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 LBX2Q6XYB7 198 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 PTPN18Q99952 460 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 LLPHQ9BRT6 129 aaKnown RBP15.85■□□□□ 0.13
SMCO4-205ENST00000529714 RIOX1Q9H6W3 641 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 HOXC10Q9NYD6 342 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 RBM27Q9P2N5 1060 aaKnown RBP15.85■□□□□ 0.13
SMCO4-205ENST00000529714 PPP1R9AQ9ULJ8 1098 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
SMCO4-205ENST00000529714 PDHXO00330 501 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 DSG3P32926 999 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 ANP32AP39687 249 aaKnown RBP15.84■□□□□ 0.13
SMCO4-205ENST00000529714 VEGFBP49765 207 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 IRX3P78415 501 aaPredicted RBP15.84■□□□□ 0.13
SMCO4-205ENST00000529714 ST3GAL1Q11201 340 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
SMCO4-205ENST00000529714 GRM1Q13255 1194 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 IFNL1Q8IU54 200 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 FAM43AQ8N2R8 423 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 SRBD1Q8N5C6 995 aaKnown RBP15.84■□□□□ 0.13
SMCO4-205ENST00000529714 GTF3C2Q8WUA4 911 aaPredicted RBP15.84■□□□□ 0.13
SMCO4-205ENST00000529714 MTMR8Q96EF0 704 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
SMCO4-205ENST00000529714 FBXO28Q9NVF7 368 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 PRR12Q9ULL5 1215 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 ADAMTS5Q9UNA0 930 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
SMCO4-205ENST00000529714 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMCO4-205ENST00000529714 CYTH3O43739 400 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 SLC16A2P36021 539 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 HTRA3P83110 453 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 NBPF11Q86T75 865 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 CCDC83Q8IWF9 413 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 ADGRF4Q8IZF3 695 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 MB21D1Q8N884 522 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 PARK7Q99497 189 aaKnown RBP15.83■□□□□ 0.12
SMCO4-205ENST00000529714 RNF26Q9BY78 433 aaPredicted RBP15.83■□□□□ 0.12
SMCO4-205ENST00000529714 UBA5Q9GZZ9 404 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.12
SMCO4-205ENST00000529714 RBM19Q9Y4C8 960 aaKnown RBP15.83■□□□□ 0.12
SMCO4-205ENST00000529714 SPDYE16A6NNV3 312 aaPredicted RBP15.82■□□□□ 0.12
SMCO4-205ENST00000529714 AOC2O75106 756 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 ALDH1A1P00352 501 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 HERVK_113P62684 666 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 TRIM22Q8IYM9 498 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 KIFC2Q96AC6 838 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 INTS4Q96HW7 963 aaKnown RBP15.82■□□□□ 0.12
SMCO4-205ENST00000529714 ZIC5Q96T25 663 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 RANBP17Q9H2T7 1088 aaKnown RBP15.82■□□□□ 0.12
SMCO4-205ENST00000529714 PNMA2Q9UL42 364 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.82■□□□□ 0.12
SMCO4-205ENST00000529714 STK36Q9NRP7 1315 aa15.82■□□□□ 0.12
SMCO4-205ENST00000529714 VWA5AO00534 786 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 FMNL1O95466 1100 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 CTDNEP1O95476 244 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 GCLCP48506 637 aaPredicted RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 OAZ1P54368 228 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 HMGN5P82970 282 aaKnown RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 SMARCC2Q8TAQ2 1214 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 ATG4CQ96DT6 458 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 RRP36Q96EU6 259 aaKnown RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 P2RX7Q99572 595 aaKnown RBP15.81■□□□□ 0.12
SMCO4-205ENST00000529714 CPVLQ9H3G5 476 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 SLC38A10Q9HBR0 1119 aa15.81■□□□□ 0.12
SMCO4-205ENST00000529714 MYH6P13533 1939 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 ATP2A1O14983 1001 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 ZBTB5O15062 677 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 ZBED4O75132 1171 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
SMCO4-205ENST00000529714 SSRP1Q08945 709 aaKnown RBP15.8■□□□□ 0.12
SMCO4-205ENST00000529714 TRAF1Q13077 416 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 CCDC82Q8N4S0 544 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 SMCR8Q8TEV9 937 aaPredicted RBP15.8■□□□□ 0.12
SMCO4-205ENST00000529714 PHKBQ93100 1093 aa15.8■□□□□ 0.12
SMCO4-205ENST00000529714 SEC63Q9UGP8 760 aaKnown RBP15.8■□□□□ 0.12
SMCO4-205ENST00000529714 COL11A1P12107 1806 aaPredicted RBP15.8■□□□□ 0.12
SMCO4-205ENST00000529714 PNMA6FA0A0J9YX94 578 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 PTPDC1A2A3K4 754 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 DEXIO95424 95 aa15.79■□□□□ 0.12
SMCO4-205ENST00000529714 TAF1CQ15572 869 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms