RNA–Protein interactions for RNA: ENST00000529679.1

PSMD13-210, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 2

Gene PSMD13, Length 507 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-210	ENST00000529679	SYNE3	Q6ZMZ3	975 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	NFXL1	Q6ZNB6	911 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	CATSPERG	Q6ZRH7	1159 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	NKX2-3	Q8TAU0	364 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	LPAR1	Q92633	364 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	TMX3	Q96JJ7	454 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	IPO9	Q96P70	1041 aa	Known RBP	10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	LRRC2	Q9BYS8	371 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	SYNPO2	Q9UMS6	1093 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	GABRQ	Q9UN88	632 aa		10.85	□□□□□ -0.67
PSMD13-210	ENST00000529679	KLF18	A0A0U1RQI7	1052 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679		A0A1W2PRG0	241 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	POTEF	A5A3E0	1075 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	DHX16	O60231	1041 aa	Known RBP	10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	DDAH1	O94760	285 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	TTLL1	O95922	423 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	CALM1	P0DP23	149 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	CALM2	P0DP24	149 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	CALM3	P0DP25	149 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	TOP1	P11387	765 aa	Known RBP	10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	ERVK-9	P63128	1117 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	ERVK-24	P63145	666 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	IRF5	Q13568	498 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	PPP2R5B	Q15173	497 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	RCSD1	Q6JBY9	416 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	APOA5	Q6Q788	366 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	CATIP	Q7Z7H3	387 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	CLEC10A	Q8IUN9	316 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	PXYLP1	Q8TE99	480 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	CEP95	Q96GE4	821 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	INTS4	Q96HW7	963 aa	Known RBP	10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	ZKSCAN3	Q9BRR0	538 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	TXNRD2	Q9NNW7	524 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	IL17RB	Q9NRM6	502 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	MTMR4	Q9NYA4	1195 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	HOXC10	Q9NYD6	342 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	RBPJL	Q9UBG7	517 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	TPCN1	Q9ULQ1	816 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	TMX2	Q9Y320	296 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	RABGAP1	Q9Y3P9	1069 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	SLC12A7	Q9Y666	1083 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	NID2	Q14112	1375 aa		10.84	□□□□□ -0.67
PSMD13-210	ENST00000529679	GOLGA8B	A8MQT2	603 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	ZBTB43	O43298	467 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	PFKFB2	O60825	505 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	MYCN	P04198	464 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	EEF2	P13639	858 aa	Known RBP	10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	ELN	P15502	786 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	EN2	P19622	333 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	PDIA3	P30101	505 aa	Known RBP	10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	APOBR	Q0VD83	1088 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	CUL4A	Q13619	759 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	COG2	Q14746	738 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	ME3	Q16798	604 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	WDR78	Q5VTH9	848 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	SPICE1	Q8N0Z3	855 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	SOCS4	Q8WXH5	440 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	MAP3K14	Q99558	947 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	RNF208	Q9H0X6	261 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	SLK	Q9H2G2	1235 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	VCPKMT	Q9H867	229 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	KAT14	Q9H8E8	782 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	GOPC	Q9HD26	462 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	NYAP2	Q9P242	653 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	STX8	Q9UNK0	236 aa		10.83	□□□□□ -0.68
PSMD13-210	ENST00000529679	GREB1L	Q9C091	1923 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	CCDC196	A0A1B0GTZ2	297 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	WDR46	O15213	610 aa	Known RBP	10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	NMT2	O60551	498 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	PEX10	O60683	326 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	FLOT1	O75955	427 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	INHA	P05111	366 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	HSP90AA1	P07900	732 aa	Known RBP	10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	CCL5	P13501	91 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	MTFR1	Q15390	333 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	NOL8	Q76FK4	1167 aa	Known RBP	10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	PLEKHH3	Q7Z736	793 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	ZNF654	Q8IZM8	581 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	PNMA1	Q8ND90	353 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	GTF3C6	Q969F1	213 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	MKL1	Q969V6	931 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	NUDT12	Q9BQG2	462 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	GPHN	Q9NQX3	736 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	BRPF3	Q9ULD4	1205 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	IVNS1ABP	Q9Y6Y0	642 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	MYH8	P13535	1937 aa		10.82	□□□□□ -0.68
PSMD13-210	ENST00000529679	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	GOLGA8A	A7E2F4	631 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	CDKL5	O76039	1030 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	CYP2B6	P20813	491 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	KIF5B	P33176	963 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	METAP2	P50579	478 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	TROAP	Q12815	778 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679		Q3C1V9	767 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	CPLX2	Q6PUV4	134 aa	Known RBP	10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	LBX2	Q6XYB7	198 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	GPR142	Q7Z601	462 aa		10.81	□□□□□ -0.68
PSMD13-210	ENST00000529679	MICU3	Q86XE3	530 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms