RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 NDUFB10O96000 172 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 TSPY3P0CV98 308 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 TSPY8P0CW00 308 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 RAG1P15918 1043 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 TAL1P17542 331 aaPredicted RBP14.47□□□□□ -0.09
USH1C-208ENST00000529563 TLE2Q04725 743 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 PDE4BQ07343 736 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 ANKRD35Q8N283 1001 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 OSBP2Q969R2 916 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 VTI1AQ96AJ9 217 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 SPC25Q9HBM1 224 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 PDLIM7Q9NR12 457 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 ZNF214Q9UL59 606 aaPredicted RBP14.47□□□□□ -0.09
USH1C-208ENST00000529563 FAM184BQ9ULE4 1060 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 PHF24Q9UPV7 400 aa14.47□□□□□ -0.09
USH1C-208ENST00000529563 COL11A1P12107 1806 aaPredicted RBP14.46□□□□□ -0.09
USH1C-208ENST00000529563 A0A1W2PQ45 241 aaPredicted RBP14.46□□□□□ -0.09
USH1C-208ENST00000529563 A0A1W2PQY0 241 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 CLTBP09497 229 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 IRX6P78412 446 aaPredicted RBP14.46□□□□□ -0.09
USH1C-208ENST00000529563 SHHQ15465 462 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 FAM109BQ6ICB4 259 aaPredicted RBP14.46□□□□□ -0.09
USH1C-208ENST00000529563 NUP133Q8WUM0 1156 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 FSD1Q9BTV5 496 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 FBXO40Q9UH90 709 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 FEM1BQ9UK73 627 aa14.46□□□□□ -0.09
USH1C-208ENST00000529563 ZNFX1Q9P2E3 1918 aaKnown RBP14.45□□□□□ -0.1
USH1C-208ENST00000529563 DCDC2CA8MYV0 355 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 TTLL1O95922 423 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 SNX17Q15036 470 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 C9orf50Q5SZB4 431 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 SH3RF1Q7Z6J0 888 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
USH1C-208ENST00000529563 MSL3Q8N5Y2 521 aaKnown RBP14.45□□□□□ -0.1
USH1C-208ENST00000529563 LENG1Q96BZ8 264 aaPredicted RBP14.45□□□□□ -0.1
USH1C-208ENST00000529563 RNPC3Q96LT9 517 aaKnown RBP14.45□□□□□ -0.1
USH1C-208ENST00000529563 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.45□□□□□ -0.1
USH1C-208ENST00000529563 NAPBQ9H115 298 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 DCTPP1Q9H773 170 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 RAVER2Q9HCJ3 691 aaKnown RBP14.45□□□□□ -0.1
USH1C-208ENST00000529563 STARD7Q9NQZ5 370 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 HOMER2Q9NSB8 354 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 TMEM39AQ9NV64 488 aa14.45□□□□□ -0.1
USH1C-208ENST00000529563 SYNGAP1Q96PV0 1343 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 DNAH12Q6ZR08 3092 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 PARP14Q460N5 1801 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 TRIM43BA6NCK2 446 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 PATL2C9JE40 543 aaKnown RBP14.44□□□□□ -0.1
USH1C-208ENST00000529563 POTEB2H3BUK9 544 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 M0R2C6 588 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 ZNF865P0CJ78 1059 aaPredicted RBP14.44□□□□□ -0.1
USH1C-208ENST00000529563 C1orf53Q5VUE5 145 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 SLFN13Q68D06 897 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 NOL8Q76FK4 1167 aaKnown RBP14.44□□□□□ -0.1
USH1C-208ENST00000529563 REPS2Q8NFH8 660 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 TRIM43Q96BQ3 446 aaPredicted RBP14.44□□□□□ -0.1
USH1C-208ENST00000529563 CHMP4CQ96CF2 233 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 CEP95Q96GE4 821 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 TSEN34Q9BSV6 310 aaKnown RBP14.44□□□□□ -0.1
USH1C-208ENST00000529563 ROBO3Q96MS0 1386 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 PLXNA1Q9UIW2 1896 aa14.44□□□□□ -0.1
USH1C-208ENST00000529563 SYNRGQ9UMZ2 1314 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 C6orf222P0C671 652 aaPredicted RBP14.43□□□□□ -0.1
USH1C-208ENST00000529563 BMP3P12645 472 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 FPGSQ05932 587 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 PPP4R3BQ5MIZ7 849 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 IFNL3Q8IZI9 196 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 EXOC6Q8TAG9 804 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 GLT1D1Q96MS3 346 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 EPB41L4AQ9HCS5 686 aaPredicted RBP14.43□□□□□ -0.1
USH1C-208ENST00000529563 MTMR4Q9NYA4 1195 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 RIPK3Q9Y572 518 aa14.43□□□□□ -0.1
USH1C-208ENST00000529563 TTC41PQ6P2S7 1318 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 MOXD2PA6NHM9 499 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 TMEM232C9JQI7 657 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 STAT2P52630 851 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 ACLYP53396 1101 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 TFAP4Q01664 338 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 ACVR2BQ13705 512 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 KCNA10Q16322 511 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
USH1C-208ENST00000529563 PCSK9Q8NBP7 692 aaKnown RBP14.42□□□□□ -0.1
USH1C-208ENST00000529563 GMCL1P1Q8NEA9 526 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 CHST13Q8NET6 341 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 CHURC1Q8WUH1 139 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 GUCD1Q96NT3 240 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 RWDD1Q9H446 243 aaPredicted RBP14.42□□□□□ -0.1
USH1C-208ENST00000529563 SLC38A10Q9HBR0 1119 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.42□□□□□ -0.1
USH1C-208ENST00000529563 MTMR7Q9Y216 660 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 LTBP2Q14767 1821 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 COL6A3P12111 3177 aa14.42□□□□□ -0.1
USH1C-208ENST00000529563 MROH7Q68CQ1 1323 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 TSPY2A6NKD2 308 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 ATP2A1O14983 1001 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 DUSP11O75319 330 aaKnown RBP14.41□□□□□ -0.1
USH1C-208ENST00000529563 SNAI1O95863 264 aaPredicted RBP14.41□□□□□ -0.1
USH1C-208ENST00000529563 FDX1P10109 184 aa14.41□□□□□ -0.1
USH1C-208ENST00000529563 SLC1A4P43007 532 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms